RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 SEMA4BQ9NPR2 832 aaPredicted RBP11.27□□□□□ -0.61
CPNE1-221ENST00000462352 STARD5Q9NSY2 213 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 DKK4Q9UBT3 224 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 PCDHB3Q9Y5E6 796 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.61
CPNE1-221ENST00000462352 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TM9SF1O15321 606 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 P2RX6O15547 441 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF749O43361 778 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CPNE3O75131 537 aaKnown RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 STK17BO94768 372 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 DLGAP3O95886 979 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 STATHP02808 62 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 NTRK1P04629 796 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CAPNS1P04632 268 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TSPAN8P19075 237 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CD82P27701 267 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ALDH3A1P30838 453 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 AHRP35869 848 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 GCGRP47871 477 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 DNAJB13P59910 316 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CLCQ05315 142 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TRAF3Q13114 568 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 LAPTM5Q13571 262 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 COL9A2Q14055 689 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 MPP2Q14168 576 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 GRM7Q14831 915 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 RBBP5Q15291 538 aaKnown RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 HIST2H2ACQ16777 129 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 HKDC1Q2TB90 917 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 PRTGQ2VWP7 1150 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TTMPQ5BVD1 217 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 PAGE2BQ5JRK9 111 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 LIPMQ5VYY2 423 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 LIPJQ5W064 366 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 HIST2H2AA3Q6FI13 130 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 GRHL2Q6ISB3 625 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 UNQ6494/PRO21346Q6UXR6 183 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TMIGD1Q6UXZ0 262 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ZFAND4Q86XD8 727 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 KRT78Q8N1N4 520 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CSNK1A1LQ8N752 337 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CCNYL1Q8N7R7 359 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TTC29Q8NA56 475 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 SLC38A9Q8NBW4 561 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 OR52B6Q8NGF0 335 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TRPC4APQ8TEL6 797 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ATP6V1E2Q96A05 226 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TM4SF19Q96DZ7 209 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 PKNOX2Q96KN3 472 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 MECRQ9BV79 373 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 NTMT1Q9BV86 223 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 PITHD1Q9GZP4 211 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 GSTO2Q9H4Y5 243 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 NT5DC2Q9H857 520 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ACTR8Q9H981 624 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ACTR5Q9H9F9 607 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ZFP69BQ9UJL9 534 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ACSL6Q9UKU0 697 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 ZNF490Q9ULM2 529 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 TMEM184BQ9Y519 407 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-221ENST00000462352 AP1M2Q9Y6Q5 423 aa11.26□□□□□ -0.61
CPNE1-221ENST00000462352 CHD8Q9HCK8 2581 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 A0A1B0GTL3 188 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 TEX51A0A1B0GUA7 166 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 STMND1H3BQB6 276 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 PPP6CO00743 305 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 TXNDC9O14530 226 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 TLX3O43711 291 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 UGDHO60701 494 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 TRIM13O60858 407 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 ZWINTO95229 277 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CLDN9O95484 217 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 BPGMP07738 259 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 HBQ1P09105 142 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 SPTBP11277 2137 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 ARL1P40616 181 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 HNF4AP41235 474 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CCNG1P51959 295 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 NAGLUP54802 743 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 PCBP4P57723 403 aaKnown RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 NAA20P61599 178 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CYP4F2P78329 520 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 RBBP7Q16576 425 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 RHBDD2Q6NTF9 364 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 TIPARPQ7Z3E1 657 aaKnown RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 MILR1Q7Z6M3 343 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 ASPGQ86U10 573 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 MYLK4Q86YV6 388 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.25□□□□□ -0.61
CPNE1-221ENST00000462352 L3MBTL4Q8NA19 623 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CAMKVQ8NCB2 501 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 GALNT6Q8NCL4 622 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 SLC13A3Q8WWT9 602 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 FGF11Q92914 225 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CLIP3Q96DZ5 547 aa11.25□□□□□ -0.61
CPNE1-221ENST00000462352 CDK15Q96Q40 435 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms