RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CYP4Z2PQ8N1L4 340 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 STX19Q8N4C7 294 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 OR52J3Q8NH60 311 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 SKA2Q8WVK7 121 aaPredicted RBP17.82■□□□□ 0.44
HPS3-204ENST00000462030 FRG2BQ96QU4 278 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 C14orf119Q9NWQ9 140 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 KCTD5Q9NXV2 234 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 FZD4Q9ULV1 537 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 SLC6A14Q9UN76 642 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 SLC22A14Q9Y267 594 aa17.82■□□□□ 0.44
HPS3-204ENST00000462030 TNFRSF11BO00300 401 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 SUV39H1O43463 412 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 EOMESO95936 686 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 RPLP2P05387 115 aaKnown RBP17.81■□□□□ 0.44
HPS3-204ENST00000462030 AOAHP28039 575 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 SRSF11Q05519 484 aaKnown RBP17.81■□□□□ 0.44
HPS3-204ENST00000462030 ABRQ12979 859 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 VEZF1Q14119 521 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 CDKN3Q16667 212 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 TRIM71Q2Q1W2 868 aaKnown RBP17.81■□□□□ 0.44
HPS3-204ENST00000462030 TSPAN33Q86UF1 283 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 L3MBTL4Q8NA19 623 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 CSGALNACT1Q8TDX6 532 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 BHMTQ93088 406 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 TP53INP1Q96A56 240 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 TTLL2Q9BWV7 592 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 NUAK2Q9H093 628 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 RAPGEFL1Q9UHV5 662 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 PCDHGA2Q9Y5H1 932 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 PEX16Q9Y5Y5 336 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 ZNF840PA6NDX5 716 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 RGS13O14921 159 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 OPN1SWP03999 348 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 ADRA2AP08913 450 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 ST3GAL4Q11206 333 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 PPIGQ13427 754 aaKnown RBP eCLIP17.81■□□□□ 0.44
HPS3-204ENST00000462030 HECTD3Q5T447 861 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 AGAP6Q5VW22 663 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 ANKS3Q6ZW76 656 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
HPS3-204ENST00000462030 OR10G2Q8NGC3 310 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 SPPL2AQ8TCT8 520 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 WFDC5Q8TCV5 224 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 CHAC2Q8WUX2 184 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 PLD4Q96BZ4 506 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 COL21A1Q96P44 957 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 AGAP4Q96P64 663 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 NIPSNAP1Q9BPW8 284 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 CHST8Q9H2A9 424 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 MBD1Q9UIS9 605 aaPredicted RBP17.81■□□□□ 0.44
HPS3-204ENST00000462030 PCDHB11Q9Y5F2 797 aa17.81■□□□□ 0.44
HPS3-204ENST00000462030 NT5C1B-RDH14C9J2C7 533 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 SMAD6O43541 496 aaKnown RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 CA12O43570 354 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 DPM1O60762 260 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 TBL1XO60907 577 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 AOC2O75106 756 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 GCM2O75603 506 aaPredicted RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 GABRB1P18505 474 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 SLC6A12P48065 614 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 TAF1CQ15572 869 aaPredicted RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 C10orf62Q5T681 223 aaPredicted RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 PRSS55Q6UWB4 352 aaPredicted RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 NANOGNBQ7Z5D8 188 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 TCAIMQ8N3R3 496 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 UTP15Q8TED0 518 aaKnown RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 CDK5RAP1Q96SZ6 601 aaKnown RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 RAD9AQ99638 391 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 ROGDIQ9GZN7 287 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 RNF38Q9H0F5 515 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 MARCH5Q9NX47 278 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 ERVK13-1Q9NX77 482 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 NDUFAF4Q9P032 175 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 CTDSP2O14595 271 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 KIAA0513O60268 411 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 CYBAP13498 195 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 SPAM1P38567 509 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 CSKP41240 450 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 GATMP50440 423 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 CASP9P55211 416 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 HSPA14Q0VDF9 509 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 DOC2BQ14184 412 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 ZNF605Q86T29 641 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 VRK3Q8IV63 474 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 GPR26Q8NDV2 337 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 FCRL1Q96LA6 429 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 BBS2Q9BXC9 721 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 FAM120CQ9NX05 1096 aaKnown RBP17.8■□□□□ 0.44
HPS3-204ENST00000462030 ADPRHL2Q9NX46 363 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 PADI2Q9Y2J8 665 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 SNX8Q9Y5X2 465 aa17.8■□□□□ 0.44
HPS3-204ENST00000462030 PLXNB3Q9ULL4 1909 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 NPIPB8E9PQR5 432 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 ADAM12O43184 909 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 ACPPP15309 386 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 PXNP49023 591 aaPredicted RBP17.79■□□□□ 0.44
HPS3-204ENST00000462030 DEFA1P59665 94 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 DEFA3P59666 94 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 B4GALNT1Q00973 533 aa17.79■□□□□ 0.44
HPS3-204ENST00000462030 CHIT1Q13231 466 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms