RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 RIC8BQ9NVN3 520 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 HRASLS2Q9NWW9 162 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 ACTR10Q9NZ32 417 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 OR6C2Q9NZP2 312 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 MAP10Q9P2G4 905 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 VPS29Q9UBQ0 182 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 EXO1Q9UQ84 846 aaKnown RBP13.74□□□□□ -0.21
PCNP-202ENST00000460231 ERVK-11Q9UQG0 969 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 BTBD3Q9Y2F9 522 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 STK38LQ9Y2H1 464 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 PCDHGA11Q9Y5H2 935 aa13.74□□□□□ -0.21
PCNP-202ENST00000460231 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 SLC28A1O00337 649 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 TRIM38O00635 465 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CFIP05156 583 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 EFNA1P20827 205 aaPredicted RBP13.73□□□□□ -0.21
PCNP-202ENST00000460231 SHMT2P34897 504 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 MSX2P35548 267 aaPredicted RBP13.73□□□□□ -0.21
PCNP-202ENST00000460231 HNRNPKP61978 463 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCNP-202ENST00000460231 PAGE3Q5JUK9 113 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 ZNF425Q6IV72 752 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 UBE3DQ7Z6J8 389 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 ZBTB44Q8NCP5 570 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
PCNP-202ENST00000460231 DCHS1Q96JQ0 3298 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 SCN2AQ99250 2005 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 KIR2DS5A0A0G2JLQ3 304 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 A0A0G2JNG1 304 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 WASHC1A8K0Z3 465 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 KIR2DS3K7RE56 304 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CCND1P24385 295 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 HSD17B2P37059 387 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 NUDT2P50583 147 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CCR8P51685 355 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 GFERP55789 205 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CFHR1Q03591 330 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CYLC2Q14093 348 aaPredicted RBP13.73□□□□□ -0.21
PCNP-202ENST00000460231 KIR2DS5Q14953 304 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 HLA-BQ31612 363 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 NOXRED1Q6NXP6 359 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 FBXO42Q6P3S6 717 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 RNF165Q6ZSG1 346 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CEP68Q76N32 757 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 KANSL1Q7Z3B3 1105 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 C17orf82Q86X59 251 aaPredicted RBP13.73□□□□□ -0.21
PCNP-202ENST00000460231 MIER2Q8N344 545 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 CREB3L4Q8TEY5 395 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 EFCAB11Q9BUY7 163 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 IL1RL2Q9HB29 575 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 FAM60AQ9NP50 221 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 SLC6A13Q9NSD5 602 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 SPASTQ9UBP0 616 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 DOLKQ9UPQ8 538 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 RNF215Q9Y6U7 377 aa13.73□□□□□ -0.21
PCNP-202ENST00000460231 LOC105369274A0A096LPK9 316 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 LOC102723532A0A0G2JNH3 316 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 AGRPO00253 132 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 AKAP10O43572 662 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 DNAJB6O75190 326 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 EEDO75530 441 aaKnown RBP13.72□□□□□ -0.21
PCNP-202ENST00000460231 C9P02748 559 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 SERPIND1P05546 499 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 PTPN4P29074 926 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 MC1RQ01726 317 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 TIGD2Q4W5G0 525 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 REP15Q6BDI9 236 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 BLOC1S3Q6QNY0 202 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 EFL1Q7Z2Z2 1120 aaKnown RBP13.72□□□□□ -0.21
PCNP-202ENST00000460231 VN1R4Q7Z5H5 301 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 OR4N4Q8N0Y3 316 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 RNF148Q8N7C7 305 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 FAM174AQ8TBP5 190 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 PPP3R2Q96LZ3 170 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 BTBD10Q9BSF8 475 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 TMEM9Q9P0T7 183 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 NEUROG3Q9Y4Z2 214 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 PLPP1O14494 284 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 GSC2O15499 205 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 P2RX6O15547 441 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 PDE5AO76074 875 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 IDO1P14902 403 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
PCNP-202ENST00000460231 DEFB110Q30KQ9 67 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 SLC2A7Q6PXP3 512 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 COMMD6Q7Z4G1 85 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 SPATA19Q7Z5L4 167 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 KCT2Q8NC54 265 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 CDC26Q8NHZ8 85 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 CHTF18Q8WVB6 975 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 CMTM7Q96FZ5 175 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 ZC3H10Q96K80 434 aaKnown RBP13.72□□□□□ -0.21
PCNP-202ENST00000460231 ABCG4Q9H172 646 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 PELI2Q9HAT8 420 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 PRM3Q9NNZ6 103 aa13.72□□□□□ -0.21
PCNP-202ENST00000460231 NOP53Q9NZM5 478 aaKnown RBP13.72□□□□□ -0.21
PCNP-202ENST00000460231 LY6G6EA0A0G2JKS1 128 aa13.71□□□□□ -0.21
PCNP-202ENST00000460231 VPS4BO75351 444 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms