RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C17orf64Q86WR6 236 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 CERS2Q96G23 380 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 FAM129AQ9BZQ8 928 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 PTGFRNQ9P2B2 879 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 BANF1O75531 89 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 UQCRHP07919 91 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 C8orf89P0DMQ9 161 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 TCP1P17987 556 aaKnown RBP21.57■■□□□ 1.04
PTPN4-207ENST00000460162 GABRB3P28472 473 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 PCOLCEQ15113 449 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 TMEM214Q6NUQ4 689 aaKnown RBP21.57■■□□□ 1.04
PTPN4-207ENST00000460162 PAQR3Q6TCH7 311 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 LCTLQ6UWM7 567 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 MBOAT1Q6ZNC8 495 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 CAMKVQ8NCB2 501 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 OR9A4Q8NGU2 314 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 LINGO1Q96FE5 620 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 TUBB6Q9BUF5 446 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 SGPP1Q9BX95 441 aa21.57■■□□□ 1.04
PTPN4-207ENST00000460162 CORO1CQ9ULV4 474 aaPredicted RBP21.57■■□□□ 1.04
PTPN4-207ENST00000460162 HIST1H2AGP0C0S8 130 aaPredicted RBP21.56■■□□□ 1.04
PTPN4-207ENST00000460162 ICAM2P13598 275 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 HIST1H2ADP20671 130 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 GRK3P35626 688 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 TNFSF10P50591 281 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 EFNA3P52797 238 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 CDKN2DP55273 166 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 PHKG1Q16816 387 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 MSS51Q4VC12 460 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 SIRT6Q8N6T7 355 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 BCORP1Q8N888 145 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 METTL21AQ8WXB1 218 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 HIST1H2AHQ96KK5 128 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 HIST1H2AJQ99878 128 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 SLX1AQ9BQ83 275 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 HAUS8Q9BT25 410 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 H2AFJQ9BTM1 129 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 VN1R1Q9GZP7 353 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 RNF32Q9H0A6 362 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 SH2B3Q9UQQ2 575 aa21.56■■□□□ 1.04
PTPN4-207ENST00000460162 TRAV17A0A0B4J275 112 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 PABPN1LA6NDY0 278 aaKnown RBP21.55■■□□□ 1.04
PTPN4-207ENST00000460162 WFS1O76024 890 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 TSPAN12O95859 305 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 AHSGP02765 367 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 STATHP02808 62 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 SLC35G6P0C7Q6 338 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 IL1RNP18510 177 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 AP1S2P56377 157 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 SNRPNP63162 240 aaKnown RBP21.55■■□□□ 1.04
PTPN4-207ENST00000460162 PDAP1Q13442 181 aaKnown RBP21.55■■□□□ 1.04
PTPN4-207ENST00000460162 NAE1Q13564 534 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 MORF4L2Q15014 288 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 BBS9Q3SYG4 887 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 CAPN13Q6MZZ7 669 aaPredicted RBP21.55■■□□□ 1.04
PTPN4-207ENST00000460162 ASPGQ86U10 573 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 PDIK1LQ8N165 341 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 CATSPER1Q8NEC5 780 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 OR1N1Q8NGS0 311 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 HAS2Q92819 552 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 TM4SF19Q96DZ7 209 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 ATG10Q9H0Y0 220 aa21.55■■□□□ 1.04
PTPN4-207ENST00000460162 C19orf25Q9UFG5 118 aaPredicted RBP21.55■■□□□ 1.04
PTPN4-207ENST00000460162 SVILO95425 2214 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 CELA2AP08217 269 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 IVDP26440 423 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 BCL6P41182 706 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 IL2P60568 153 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 SYDE1Q6ZW31 735 aaPredicted RBP21.54■■□□□ 1.04
PTPN4-207ENST00000460162 PRSS41Q7RTY9 318 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 OR51Q1Q8NH59 317 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 IMMP1LQ96LU5 166 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 ANKHQ9HCJ1 492 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 OLAHQ9NV23 265 aa21.54■■□□□ 1.04
PTPN4-207ENST00000460162 NOTCH2Q04721 2471 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 JRKO75564 520 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 CLDN1O95832 211 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 ITGAMP11215 1152 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 CDH1P12830 882 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 XCR1P46094 333 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 MINDY4Q4G0A6 757 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 TEDDM1Q5T9Z0 273 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 MFSD4BQ5TF39 518 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 FAM45BPQ6NSW5 357 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 HIBCHQ6NVY1 386 aaPredicted RBP21.53■■□□□ 1.04
PTPN4-207ENST00000460162 IGDCC3Q8IVU1 814 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 GPATCH11Q8N954 259 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 ZCCHC10Q8TBK6 192 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 FAM45AQ8TCE6 357 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 ALKBH8Q96BT7 664 aaKnown RBP21.53■■□□□ 1.04
PTPN4-207ENST00000460162 LRRC39Q96DD0 335 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 RUNDC3BQ96NL0 473 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 SARGQ9BW04 601 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 PLAC1Q9HBJ0 212 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 PPANQ9NQ55 473 aaKnown RBP21.53■■□□□ 1.04
PTPN4-207ENST00000460162 ARL15Q9NXU5 204 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 HCN3Q9P1Z3 774 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 SLC17A6Q9P2U8 582 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 SLC22A7Q9Y694 548 aa21.53■■□□□ 1.04
PTPN4-207ENST00000460162 ZGRF1Q86YA3 2104 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms