RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TDRKHQ9Y2W6 561 aaKnown RBP10.73□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MEMO1Q9Y316 297 aa10.73□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MRPS2Q9Y399 296 aaKnown RBP10.73□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PCDHGB6Q9Y5F9 930 aa10.73□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ZNF469Q96JG9 3925 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 SNRNP200O75643 2136 aaKnown RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CCL22O00626 93 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PRAMEF2O60811 474 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MED26O95402 600 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NUDT7P0C024 238 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NUDT17P0C025 328 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 RPS3P23396 243 aaKnown RBP eCLIP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MC4RP32245 332 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 STX2P32856 288 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 GRIA3P42263 894 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CDKN1CP49918 316 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PRSS12P56730 875 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PRAMEP78395 509 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 RPA4Q13156 261 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 BRD3Q15059 726 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ATG9BQ674R7 924 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MRNIPQ6NTE8 343 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CNSTQ6PJW8 725 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 Q6ZPB1 254 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 LRRC6Q86X45 466 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PIANPQ8IYJ0 282 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CLDN19Q8N6F1 224 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 C2CD4AQ8NCU7 369 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 GABPB2Q8TAK5 448 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 STT3BQ8TCJ2 826 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 DENND1AQ8TEH3 1009 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 IFT81Q8WYA0 676 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NRGNQ92686 78 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PKNOX2Q96KN3 472 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TREX2Q9BQ50 279 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TSPAN10Q9H1Z9 355 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CDC42EP4Q9H3Q1 356 aaKnown RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PPCSQ9HAB8 311 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 SAYSD1Q9NPB0 183 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NSMCE4AQ9NXX6 385 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NINJ2Q9NZG7 142 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CORO1CQ9ULV4 474 aaPredicted RBP10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CHMP2BQ9UQN3 213 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MAD1L1Q9Y6D9 718 aa10.72□□□□□ -0.69
PRAMEF35P-201ENST00000458709 OR5H15A6NDH6 313 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 FAM227AF5H4B4 570 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 QSOX1O00391 747 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ZNHIT1O43257 154 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 BANF1O75531 89 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 FAM155BO75949 473 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 AP2A2O94973 939 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 VAPBO95292 243 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 BMP10O95393 424 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 GOT2P00505 430 aaKnown RBP10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 SERPINA7P05543 415 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ZGLP1P0C6A0 271 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 FAM153BP0C7A2 387 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 PRSS56P0CW18 603 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ITGAMP11215 1152 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 DRD2P14416 443 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 FDXRP22570 491 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ACADLP28330 430 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MGAT5Q09328 741 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 GRM7Q14831 915 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 KIR2DS3Q14952 304 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 FAM153CQ494X1 144 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TEDDM1Q5T9Z0 273 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NEPROQ6NW34 567 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CASC4Q6P4E1 433 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TRMT10BQ6PF06 316 aaKnown RBP10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NAPRTQ6XQN6 538 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 C3orf62Q6ZUJ4 267 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 NDUFAF7Q7L592 441 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TAX1BP1Q86VP1 789 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 SPPL2CQ8IUH8 684 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TBC1D21Q8IYX1 336 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 TTC29Q8NA56 475 aaPredicted RBP10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 SUN3Q8TAQ9 357 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 LPGAT1Q92604 370 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ZNF669Q96BR6 464 aaPredicted RBP10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 MIEF2Q96C03 454 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 RNF32Q9H0A6 362 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 P2RY12Q9H244 342 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 VPS37BQ9H9H4 285 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 GPAMQ9HCL2 828 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CATSPERZQ9NTU4 200 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 ZDHHC3Q9NYG2 299 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 KLHL42Q9P2K6 505 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 COMMD10Q9Y6G5 202 aa10.71□□□□□ -0.69
PRAMEF35P-201ENST00000458709 CPAMD8Q8IZJ3 1885 aa10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 IGHV1-45A0A0A0MS14 117 aa10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 FFAR3O14843 346 aa10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 CD3EAPO15446 510 aaKnown RBP10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 GPR42O15529 346 aa10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 RIPK2O43353 540 aa10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 WFS1O76024 890 aa10.7□□□□□ -0.7
PRAMEF35P-201ENST00000458709 S1PR4O95977 384 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms