RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 OR2AG2A6NM03 316 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 MANBAO00462 879 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RGS14O43566 566 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 MYO1DO94832 1006 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 HPRP00739 348 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 NPPAP01160 153 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CYP17A1P05093 508 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 TNFRSF1BP20333 461 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 DGKAP23743 735 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RECQLP46063 649 aaPredicted RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 SLC6A11P48066 632 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 DGKEP52429 567 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RPS3AP61247 264 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GRIN2CQ14957 1233 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 MACC1Q6ZN28 852 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GPR149Q86SP6 731 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ANKRD13BQ86YJ7 626 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ZCCHC7Q8N3Z6 543 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF540Q8NDQ6 660 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 OR5K1Q8NHB7 308 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 RORBQ92753 470 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 APIPQ96GX9 242 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 PDLIM5Q96HC4 596 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CNDP2Q96KP4 475 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CPEB1Q9BZB8 566 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 PARVBQ9HBI1 364 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 SLC6A14Q9UN76 642 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF106Q9H2Y7 1883 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 AGAP14A8MT82 685 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 WASH3PC4AMC7 463 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 NUDT7P0C024 238 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GRK5P34947 590 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GZMMP51124 257 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 GPR33Q49SQ1 333 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ADNP2Q6IQ32 1131 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ZCCHC8Q6NZY4 707 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ADHFE1Q8IWW8 467 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CPPED1Q9BRF8 314 aaPredicted RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 CD244Q9BZW8 370 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 ZDHHC3Q9NYG2 299 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 PDP1Q9P0J1 537 aaPredicted RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 TSC22D4Q9Y3Q8 395 aa12.01□□□□□ -0.49
LINC00959-201ENST00000456581 FAM32AQ9Y421 112 aaKnown RBP12.01□□□□□ -0.49
LINC00959-201ENST00000456581 NUMA1Q14980 2115 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 A0A096LPI6 279 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 TRBV5-3A0A0A0MS03 114 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 PRRT4C9JH25 899 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 KDM1AO60341 852 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 VIPP01282 170 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 TIMP2P16035 220 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 ITIH1P19827 911 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 PTPN6P29350 595 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 C21orf33P30042 268 aaPredicted RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 KRT20P35900 424 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 NSG1P42857 185 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 DOC2BQ14184 412 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 CLCA4Q14CN2 919 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 CYP27C1Q4G0S4 372 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 CACHD1Q5VU97 1274 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 UBE2Q1Q7Z7E8 422 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 ADCK1Q86TW2 530 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 CLECL1Q8IZS7 167 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 CBARPQ8N350 705 aaPredicted RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 PIK3C3Q8NEB9 887 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 MAL2Q969L2 176 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 PYURFQ96I23 114 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 APOLD1Q96LR9 279 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 RIOK2Q9BVS4 552 aaKnown RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 C1orf109Q9NX04 203 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 PPIL1Q9Y3C6 166 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 FADS2P1A8MWK0 482 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 IFRD1O00458 451 aaPredicted RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 MSH3P20585 1137 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 ITPKAP23677 461 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 HOXA9P31269 272 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 EPS8Q12929 822 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 TP53BP2Q13625 1128 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 ZNF846Q147U1 533 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 COLEC12Q5KU26 742 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 HERVK_113Q902F9 699 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 SMG7Q92540 1137 aaKnown RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 TPD52L3Q96J77 140 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 WRAP53Q9BUR4 548 aaKnown RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 USE1Q9NZ43 259 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 TNPO3Q9Y5L0 923 aaKnown RBP12□□□□□ -0.49
LINC00959-201ENST00000456581 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
LINC00959-201ENST00000456581 YY2O15391 372 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PRAMEF4O60810 478 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 GABARAPO95166 117 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 ABCB1P08183 1280 aaPredicted RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 TCEA1P23193 301 aaKnown RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PBX2P40425 430 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 NRIP1P48552 1158 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 NUDT6P53370 316 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 SLC35A2P78381 396 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PRAMEF9Q5VWM5 478 aa11.99□□□□□ -0.49
LINC00959-201ENST00000456581 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
LINC00959-201ENST00000456581 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms