RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 BRICD5Q6PL45 260 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ARMCX6Q7L4S7 300 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 TSEN54Q7Z6J9 526 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 SLCO6A1Q86UG4 719 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 DCUN1D3Q8IWE4 304 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 SCUBE1Q8IWY4 988 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 RBM12BQ8IXT5 1001 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 KIAA2013Q8IYS2 634 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 DSELQ8IZU8 1212 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ASZ1Q8WWH4 475 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ASB9Q96DX5 294 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CCDC126Q96EE4 140 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ZNF597Q96LX8 424 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 CLMPQ9H6B4 373 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 DDX31Q9H8H2 851 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 AKTIPQ9H8T0 292 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 FAM60AQ9NP50 221 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ACSS2Q9NR19 701 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CUEDC1Q9NWM3 386 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 TAS2R7Q9NYW3 318 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 TMEM9Q9P0T7 183 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 APOBEC3BQ9UH17 382 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 CROCCQ5TZA2 2017 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 OR5K3A6NET4 321 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 K7EPI3 171 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CYR61O00622 381 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 FPGTO14772 594 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 VPS26AO75436 327 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PSMB5P28074 263 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PIK3CBP42338 1070 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PXNP49023 591 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 NAGLUP54802 743 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PKNOX1P55347 436 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PRAMEP78395 509 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 SLC25A3Q00325 362 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PRDX1Q06830 199 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 BNIP3Q12983 259 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CUL3Q13618 768 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 SEPT6Q14141 434 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 SQLEQ14534 574 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CATSPEREQ5SY80 951 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 REP15Q6BDI9 236 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 LAIR2Q6ISS4 152 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 AGTRAPQ6RW13 159 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CHERPQ8IWX8 916 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 ARL14Q8N4G2 192 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 MARVELD2Q8N4S9 558 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 MFSD9Q8NBP5 474 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 NUDT8Q8WV74 236 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 KLK6Q92876 244 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 UCN3Q969E3 161 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ZUFSPQ96AP4 578 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 HSPA12BQ96MM6 686 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 TRAPPC9Q96Q05 1148 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 TEFMQ96QE5 360 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 CARS2Q9HA77 564 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 NTN4Q9HB63 628 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 TCF7L2Q9NQB0 619 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 SIRT3Q9NTG7 399 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 CMTM6Q9NX76 183 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 EIF2B4Q9UI10 523 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 DSPPQ9NZW4 1301 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 PCNX3Q9H6A9 2034 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 A0A1B0GTW7 788 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 VSTM2BA6NLU5 285 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 NME4O00746 187 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 HAT1O14929 419 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 BCAT2O15382 392 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 SYNCRIPO60506 623 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 RNASEH1O60930 286 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 PDYNP01213 254 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ENO1P06733 434 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 ABCB1P08183 1280 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 GSTM2P28161 218 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 EPHA3P29320 983 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 EEF1DP29692 281 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 AKT2P31751 481 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 GDF5P43026 501 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 IRX4P78413 519 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CSTF3Q12996 717 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 STARD3Q14849 445 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 UBXN2BQ14CS0 331 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 SMAD1Q15797 465 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 SFT2D3Q587I9 215 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 LAIR1Q6GTX8 287 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 NXPE4Q6UWF7 544 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 AMZ2Q86W34 360 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 THOC6Q86W42 341 aaKnown RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 CARM1Q86X55 608 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 CTAGE3PQ8IX95 158 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 METTL4Q8N3J2 472 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 TESCQ96BS2 214 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ROPN1LQ96C74 230 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ZNF501Q96CX3 271 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 SIGLEC11Q96RL6 698 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 ILKAPQ9H0C8 392 aaPredicted RBP4.74□□□□□ -1.65
RIF1-207ENST00000454583 SLC26A1Q9H2B4 701 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 DMRT3Q9NQL9 472 aa4.74□□□□□ -1.65
RIF1-207ENST00000454583 UBAP1Q9NZ09 502 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms