RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 SPATA7Q9P0W8 599 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CNOT11Q9UKZ1 510 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 SAMD4AQ9UPU9 718 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CHD5Q8TDI0 1954 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 NLRC5Q86WI3 1866 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 TCRBV5S2A0A599 114 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ACOX3O15254 700 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PRAMEF4O60810 478 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 MYF6P23409 242 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 DCTP40126 519 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PFN3P60673 137 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CD47Q08722 323 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ITGADQ13349 1161 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 SYT16Q17RD7 645 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PLEKHS1Q5SXH7 462 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PRAMEF9Q5VWM5 478 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CCDC80Q76M96 950 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 MMP21Q8N119 569 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 NAGSQ8N159 534 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 AADATQ8N5Z0 425 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 C1QTNF3Q9BXJ4 246 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 KAT8Q9H7Z6 458 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 FZD3Q9NPG1 666 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CCDC177Q9NQR7 707 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 FAM118AQ9NWS6 357 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 KLHL20Q9Y2M5 609 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ARID1BQ8NFD5 2236 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 GABRR3A8MPY1 467 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 CYP17A1P05093 508 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ZNF30P17039 623 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 MAGP20916 626 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 PSMB5P28074 263 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 TIE1P35590 1138 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 PSMD7P51665 324 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 MANFP55145 182 aaKnown RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 NUP107P57740 925 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ZXDCQ2QGD7 858 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ADCK1Q86TW2 530 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 MSRB3Q8IXL7 192 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 CRIPAKQ8N1N5 446 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 PACRGLQ8N7B6 248 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 TTC29Q8NA56 475 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 HM13Q8TCT9 377 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ZNF480Q8WV37 535 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ZNF689Q96CS4 500 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 RAD9AQ99638 391 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 KLHL25Q9H0H3 589 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ZNF556Q9HAH1 456 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 PTPRDP23468 1912 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 IGLON5A6NGN9 336 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 OR1F1O43749 312 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 VIPP01282 170 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 CHRM5P08912 532 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 PIM1P11309 404 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 CCNA2P20248 432 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 FSHRP23945 695 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 RRM2P31350 389 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 KDELR2P33947 212 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ZFP36L2P47974 494 aaKnown RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ABHD18Q0P651 414 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 MADCAM1Q13477 382 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 RAPSNQ13702 412 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 OR2T5Q6IEZ7 315 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 HEATR4Q86WZ0 1026 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 DPP10Q8N608 796 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 OR2T29Q8NH02 315 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 NFKBIDQ8NI38 313 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 XAGE5Q8WWM1 108 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 TFGQ92734 400 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-213ENST00000454468 NODALQ96S42 347 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 SLC35A5Q9BS91 424 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 EQTNQ9NQ60 294 aa11.55□□□□□ -0.56
SMPD4-213ENST00000454468 ARNTLO00327 626 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 NUAK1O60285 661 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 ATE1O95260 518 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 SRSF11Q05519 484 aaKnown RBP11.54□□□□□ -0.56
SMPD4-213ENST00000454468 UGT8Q16880 541 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 ZBED5Q49AG3 693 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 PAGE2BQ5JRK9 111 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 ZDHHC20Q5W0Z9 365 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 FLCNQ8NFG4 579 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 OR14C36Q8NHC7 312 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 BPIFB1Q8TDL5 484 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 LZICQ8WZA0 190 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 IL23AQ9NPF7 189 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 RPS6KA6Q9UK32 745 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 A0A096LPI6 279 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 H3BN98 237 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 AREL1O15033 823 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 ANKRD28O15084 1053 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 CD22P20273 847 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 IMPA1P29218 277 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 SOX9P48436 509 aa11.54□□□□□ -0.56
SMPD4-213ENST00000454468 SGCGQ13326 291 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms