RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 REXO1L1PQ8IX06 675 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RAB42Q8N4Z0 105 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CCDC89Q8N998 374 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KCT2Q8NC54 265 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR9A1PQ8NGU1 263 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SUN3Q8TAQ9 357 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF480Q8WV37 535 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CHTF18Q8WVB6 975 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SMPDL3AQ92484 453 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 HAS2Q92819 552 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NACC2Q96BF6 587 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ALKBH8Q96BT7 664 aaKnown RBP5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SDCCAG3Q96C92 435 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PEX11GQ96HA9 241 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 VPS50Q96JG6 964 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GPR137Q96N19 417 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PRAP1Q96NZ9 151 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TTC1Q99614 292 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 C19orf43Q9BQ61 176 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CARD6Q9BX69 1037 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TRIM5Q9C035 493 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KCNK13Q9HB14 408 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CHST11Q9NPF2 352 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MKKSQ9NPJ1 570 aaPredicted RBP5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NPDC1Q9NQX5 325 aaPredicted RBP5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FBXO6Q9NRD1 293 aaPredicted RBP5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ENAMQ9NRM1 1142 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 STMN3Q9NZ72 180 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SPATA7Q9P0W8 599 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC17A6Q9P2U8 582 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TNFRSF10DQ9UBN6 386 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ANAPC5Q9UJX4 755 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 EFR3BQ9Y2G0 817 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MED16Q9Y2X0 877 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MEMO1Q9Y316 297 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PCDHGB6Q9Y5F9 930 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KLK4Q9Y5K2 254 aa5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 EPN1Q9Y6I3 576 aaPredicted RBP5.65□□□□□ -1.5
HLA-DPA3-207ENST00000454398 HCFC1P51610 2035 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TARM1B6A8C7 271 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C4orf51C9J302 202 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 G3V3Y1 287 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ADAM10O14672 748 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TTI1O43156 1089 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PRPF4O43172 522 aaKnown RBP eCLIP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CDC40O60508 579 aaKnown RBP eCLIP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SRPX2O60687 465 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PSIP1O75475 530 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SLC25A12O75746 678 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NEURL1O76050 574 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IPO7O95373 1038 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MATN4O95460 622 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NADKO95544 446 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CDH1P12830 882 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MAOAP21397 527 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FDXRP22570 491 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ADRA1DP25100 572 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IMPA1P29218 277 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EEF1DP29692 281 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SSTR2P30874 369 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RPL22P35268 128 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CETN2P41208 172 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MPP1Q00013 466 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GBX1Q14549 363 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MAPKAPK3Q16644 382 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 LONRF1Q17RB8 773 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TYSND1Q2T9J0 566 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ANKRD22Q5VYY1 191 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PLAG1Q6DJT9 500 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TTC23LQ6PF05 361 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C16orf47Q6ZP98 133 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CEP128Q6ZU80 1094 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CPEB2Q7Z5Q1 589 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMEM200AQ86VY9 491 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SPPL2CQ8IUH8 684 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCDC71Q8IV32 467 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DENND6AQ8IWF6 608 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CPNE9Q8IYJ1 553 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCDC170Q8IYT3 715 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 UBL4BQ8N7F7 174 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ACBD4Q8NC06 268 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR51Q1Q8NH59 317 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HMGCLL1Q8TB92 370 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 THAP3Q8WTV1 239 aaPredicted RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 METTL21AQ8WXB1 218 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZUFSPQ96AP4 578 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 POM121Q96HA1 1249 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PWWP2AQ96N64 755 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FOPNLQ96NB1 174 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PANX3Q96QZ0 392 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NDNQ99608 321 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 UTP23Q9BRU9 249 aaKnown RBP5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TUBB6Q9BUF5 446 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 UCK2Q9BZX2 261 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RNF32Q9H0A6 362 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RUBCNLQ9H714 662 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ADAMTS6Q9UKP5 1117 aa5.64□□□□□ -1.51
HLA-DPA3-207ENST00000454398 AMFRQ9UKV5 643 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms