RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ACTR1BP42025 376 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 CCR10P46092 362 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 HLCSP50747 726 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 ACTR1AP61163 376 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 PCBP2Q15366 365 aaKnown RBP eCLIP15.31■□□□□ 0.047e-11■■■□□ 17.7
SNX17-204ENST00000453453 UAP1L1Q3KQV9 507 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 ZNF528Q3MIS6 628 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 TBCELQ5QJ74 424 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 FKBP9P1Q75LS8 142 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 DCUN1D3Q8IWE4 304 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 PHACTR4Q8IZ21 702 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 FBXL8Q96CD0 374 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 PPP1R36Q96LQ0 422 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 C1QTNF3Q9BXJ4 246 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 PAIP1Q9H074 479 aaKnown RBP15.31■□□□□ 0.04
SNX17-204ENST00000453453 TMEM168Q9H0V1 697 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 GID8Q9NWU2 228 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 SUSD2Q9UGT4 822 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 TMED5Q9Y3A6 229 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 ANGPTL3Q9Y5C1 460 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 HEBP2Q9Y5Z4 205 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 SLCO1B1Q9Y6L6 691 aa15.31■□□□□ 0.04
SNX17-204ENST00000453453 TP53BP1Q12888 1972 aaPredicted RBP15.31■□□□□ 0.04
SNX17-204ENST00000453453 ZDBF2Q9HCK1 2354 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 PRR19A6NJB7 356 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 SIX3O95343 332 aaPredicted RBP15.3■□□□□ 0.04
SNX17-204ENST00000453453 WNT1P04628 370 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 RPS17P08708 135 aaKnown RBP15.3■□□□□ 0.04
SNX17-204ENST00000453453 ATP6V1B2P21281 511 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 AVPR2P30518 371 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 PIK3CGP48736 1102 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 CCT8P50990 548 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 SLC7A2P52569 658 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 ATXN3P54252 364 aaPredicted RBP15.3■□□□□ 0.04
SNX17-204ENST00000453453 CDH15P55291 814 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 KRT33BQ14525 404 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 RAB39AQ14964 217 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 UNC50Q53HI1 259 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 CCNYL2Q5T2Q4 361 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 USP51Q70EK9 711 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 CBR4Q8N4T8 237 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 RAB42Q8N4Z0 105 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 TRPV3Q8NET8 790 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 C1orf216Q8TAB5 229 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 CANT1Q8WVQ1 401 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 RAD51AP1Q96B01 352 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 NRBF2Q96F24 287 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 C12orf66Q96MD2 445 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 ZSCAN32Q9NX65 697 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 OPTCQ9UBM4 332 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 APOBEC3BQ9UH17 382 aaKnown RBP15.3■□□□□ 0.04
SNX17-204ENST00000453453 ZNF639Q9UID6 485 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 FANCMQ8IYD8 2048 aa15.3■□□□□ 0.04
SNX17-204ENST00000453453 TNRC6BQ9UPQ9 1833 aaKnown RBP15.29■□□□□ 0.04
SNX17-204ENST00000453453 CLOCKO15516 846 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 KDM1AO60341 852 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 DNAJB5O75953 348 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 ATE1O95260 518 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 JUNDP17535 347 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 ITPKAP23677 461 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 HSPA7P48741 367 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 AGTR2P50052 363 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 NXPH1P58417 271 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.29■□□□□ 0.04
SNX17-204ENST00000453453 ZNF773Q6PK81 442 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 WASH2PQ6VEQ5 465 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 MBOAT1Q6ZNC8 495 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 LARP4Q71RC2 724 aaKnown RBP eCLIP15.29■□□□□ 0.043e-7■■■□□ 18.7
SNX17-204ENST00000453453 CUZD1Q86UP6 607 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 EPHX4Q8IUS5 362 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 TBC1D21Q8IYX1 336 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 DHRSXQ8N5I4 330 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 OR9A1PQ8NGU1 263 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 OR5K2Q8NHB8 316 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 GPBAR1Q8TDU6 330 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 PHF12Q96QT6 1004 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 CD244Q9BZW8 370 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 GSTO2Q9H4Y5 243 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 GPN2Q9H9Y4 310 aaPredicted RBP15.29■□□□□ 0.04
SNX17-204ENST00000453453 WASH6PQ9NQA3 447 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 IMP3Q9NV31 184 aaKnown RBP15.29■□□□□ 0.04
SNX17-204ENST00000453453 TMEM45AQ9NWC5 275 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 POLG2Q9UHN1 485 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 PCTPQ9UKL6 214 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
SNX17-204ENST00000453453 STK16O75716 305 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 SULT1C4O75897 302 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 MLYCDO95822 493 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 EIF2S1P05198 315 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 SLC2A4P14672 509 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CKMT2P17540 419 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 AK4P27144 223 aaPredicted RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 GGT5P36269 586 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 GRIA3P42263 894 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 CLCQ05315 142 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 LCP2Q13094 533 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 SRSF5Q13243 272 aaKnown RBP15.28■□□□□ 0.04
SNX17-204ENST00000453453 RBBP7Q16576 425 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 PLK5Q496M5 336 aa15.28■□□□□ 0.04
SNX17-204ENST00000453453 ANKRD26P1Q6NSI1 321 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms