RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 DNAJC11Q9NVH1 559 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 QPCTLQ9NXS2 382 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 FAM8A1Q9UBU6 413 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 GABRQQ9UN88 632 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 BTBD3Q9Y2F9 522 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 UGT2A1Q9Y4X1 527 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 PCDHB11Q9Y5F2 797 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 MED26O95402 600 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 OPN1SWP03999 348 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 CDK1P06493 297 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 ABCB1P08183 1280 aaPredicted RBP15.2■□□□□ 0.02
TRA2B-205ENST00000453386 GGT2P36268 569 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 SMAD3P84022 425 aaKnown RBP15.2■□□□□ 0.02
TRA2B-205ENST00000453386 PLD1Q13393 1074 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 IQCCQ4KMZ1 466 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 ATP13A5Q4VNC0 1218 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 FAM124AQ86V42 546 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 VRK3Q8IV63 474 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 METTL4Q8N3J2 472 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 KBTBD8Q8NFY9 601 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 HHIPQ96QV1 700 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 P2RY13Q9BPV8 354 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 CENPOQ9BU64 300 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 DUSP26Q9BV47 211 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 GABARAPL3Q9BY60 117 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 FAM120CQ9NX05 1096 aaKnown RBP15.2■□□□□ 0.02
TRA2B-205ENST00000453386 TMEM161AQ9NX61 479 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 PLXNA4Q9HCM2 1894 aa15.2■□□□□ 0.02
TRA2B-205ENST00000453386 NPIPB15A6NHN6 443 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 M0R129 80 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 PRPH2P23942 346 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 TUFMP49411 452 aaKnown RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 CRISP3P54108 245 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ACSM2AQ08AH3 577 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 VEZF1Q14119 521 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 CDKN3Q16667 212 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 C6orf183Q5T699 404 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ACSM2BQ68CK6 577 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 CCBE1Q6UXH8 406 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 RFLNAQ6ZTI6 216 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 SYNPOQ8N3V7 929 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 C2orf15Q8WU43 125 aaKnown RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ARHGAP39Q9C0H5 1083 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 RLIMQ9NVW2 624 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ZDHHC3Q9NYG2 299 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 VPS29Q9UBQ0 182 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 MBD1Q9UIS9 605 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 GFRA2O00451 464 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 CRYBA2P53672 197 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 B4GALNT1Q00973 533 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ZNF45Q02386 682 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ST3GAL4Q11206 333 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 RETSATQ6NUM9 610 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ZNF783Q6ZMS7 281 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 ATL1Q8WXF7 558 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 KLF16Q9BXK1 252 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-205ENST00000453386 RAPGEFL1Q9UHV5 662 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 OR51B4Q9Y5P0 310 aa15.19■□□□□ 0.02
TRA2B-205ENST00000453386 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.18■□□□□ 0.02
TRA2B-205ENST00000453386 PTTG1O95997 202 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 PTHP01270 115 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 HMGA1P17096 107 aaKnown RBP15.18■□□□□ 0.02
TRA2B-205ENST00000453386 OR1E2P47887 323 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 PPIGQ13427 754 aaKnown RBP eCLIP15.18■□□□□ 0.023e-7■■■□□ 16.4
TRA2B-205ENST00000453386 XKR6Q5GH73 641 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 NAGSQ8N159 534 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 TCAIMQ8N3R3 496 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 OR10G2Q8NGC3 310 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 ASB11Q8WXH4 323 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 UPF1Q92900 1129 aaKnown RBP eCLIP15.18■□□□□ 0.025e-10■■□□□ 13.8
TRA2B-205ENST00000453386 DOHHQ9BU89 302 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 IMPAD1Q9NX62 359 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 SNX8Q9Y5X2 465 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 LYVE1Q9Y5Y7 322 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 EIF2S1P05198 315 aaKnown RBP15.18■□□□□ 0.02
TRA2B-205ENST00000453386 C8GP07360 202 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 OR56A5P0C7T3 313 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 ADORA3P0DMS8 318 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 POU2F1P14859 743 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 TCEA1P23193 301 aaKnown RBP15.18■□□□□ 0.02
TRA2B-205ENST00000453386 SLC6A12P48065 614 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 HNMTP50135 292 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 CDH12P55289 794 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 DMC1Q14565 340 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 CDKL4Q5MAI5 379 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 SPANXN2Q5MJ10 180 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 CPTPQ5TA50 214 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 TTC23LQ6PF05 361 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 SPATC1Q76KD6 591 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 OR8J2Q8NGG1 315 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 C2orf49Q9BVC5 232 aaPredicted RBP15.18■□□□□ 0.02
TRA2B-205ENST00000453386 HOXD1Q9GZZ0 328 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 KLHL3Q9UH77 587 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 HAT1O14929 419 aa15.18■□□□□ 0.02
TRA2B-205ENST00000453386 DYRK3O43781 588 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms