RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ALOXE3Q9BYJ1 711 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 TTTY10Q9BZA0 68 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 C12orf4Q9NQ89 552 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 B3GNT3Q9Y2A9 372 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 TRPV2Q9Y5S1 764 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 MEIOCA2RUB1 952 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 MUSKO15146 869 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 IFNW1P05000 195 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 RGRP47804 291 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 UGT2B15P54855 530 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 EXOC3L2Q2M3D2 409 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 IFI44LQ53G44 452 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 MTMR14Q8NCE2 650 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 OR5H6Q8NGV6 325 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 JPH3Q8WXH2 748 aaPredicted RBP12.02□□□□□ -0.49
UBE3B-204ENST00000449510 ISL2Q96A47 359 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 APIPQ96GX9 242 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 NLNQ9BYT8 704 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 ZNF385DQ9H6B1 395 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 SEMA3GQ9NS98 782 aa12.02□□□□□ -0.49
UBE3B-204ENST00000449510 EIF3KQ9UBQ5 218 aaKnown RBP12.02□□□□□ -0.49
UBE3B-204ENST00000449510 FAM155AB1AL88 458 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 SLC28A2O43868 658 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CRYZL1O95825 349 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 ETFAP13804 333 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CDKN2CP42773 168 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 MANFP55145 182 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 YBEYP58557 167 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 DCDC1P59894 354 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 SCAPQ12770 1279 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CCL14Q16627 93 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 GDPD3Q7L5L3 318 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 LHFPL3Q86UP9 236 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CARS2Q9HA77 564 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 DCAF13Q9NV06 445 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 DNAJC11Q9NVH1 559 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 ABCD2Q9UBJ2 740 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 SEC14L3Q9UDX4 400 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 K7ERQ8 282 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 NFKBIEO00221 500 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 PTHP01270 115 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CACNG1Q06432 222 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 GPR162Q16538 588 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 LRIT3Q3SXY7 679 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 LEXMQ3ZCV2 418 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 MTFR2Q6P444 385 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 PRSS48Q7RTY5 328 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 BCDIN3DQ7Z5W3 292 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 TSPYL5Q86VY4 417 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CYP4Z2PQ8N1L4 340 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CELF5Q8N6W0 485 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 BEND7Q8N7W2 519 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 FCGR1BQ92637 280 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 EXOSC8Q96B26 276 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 OR5M11Q96RB7 305 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 FAM129BQ96TA1 746 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 OSGEPL1Q9H4B0 414 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 ANKRA2Q9H9E1 313 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 IL20RAQ9UHF4 553 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 PCDHGA12O60330 932 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 SCO1O75880 301 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CHRNB1P11230 501 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 EDNRBP24530 442 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 NOS3P29474 1203 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 NNMTP40261 264 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 GALNT1Q10472 559 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CTF1Q16619 201 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 LRRC26Q2I0M4 334 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 CCDC58Q4VC31 144 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 FGD2Q7Z6J4 655 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 IQCF1Q8N6M8 205 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 GANCQ8TET4 914 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 SLC35B4Q969S0 331 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 MYO19Q96H55 970 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 MCMBPQ9BTE3 642 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 HDHD5Q9BXW7 423 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 NFKBIZQ9BYH8 718 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 AP3M1Q9Y2T2 418 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 DYRK1BQ9Y463 629 aa12.01□□□□□ -0.49
UBE3B-204ENST00000449510 DDX60Q8IY21 1712 aaKnown RBP12.01□□□□□ -0.49
UBE3B-204ENST00000449510 A0A1W2PPK0 400 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 A0A1W2PQL4 384 aaPredicted RBP12□□□□□ -0.49
UBE3B-204ENST00000449510 FAM227AF5H4B4 570 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 H3BSH0 61 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 LAMP1P11279 417 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 ITGA2P17301 1181 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PRKACBP22694 351 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 OR1D2P34982 312 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.496e-6■■■□□ 18.4
UBE3B-204ENST00000449510 SERINC3Q13530 473 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 DCST1Q5T197 706 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 CPZQ66K79 652 aa12□□□□□ -0.49
UBE3B-204ENST00000449510 LRRC66Q68CR7 880 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms