RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 CLK1P49759 484 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 NCS1P62166 190 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 POLR2LP62875 67 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 KCNJ10P78508 379 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 LAPTM4AQ15012 233 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 ZNF181Q2M3W8 571 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 CPTPQ5TA50 214 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 USP43Q70EL4 1123 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 ARL14EPQ8N8R7 260 aaPredicted RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 MCFD2Q8NI22 146 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 COPS4Q9BT78 406 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 EBPLQ9BY08 206 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 FKBP14Q9NWM8 211 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 PSORS1C1Q9UIG5 152 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 FZD4Q9ULV1 537 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 VPS4AQ9UN37 437 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 PCDHGA6Q9Y5G7 932 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 RNASET2O00584 256 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 MAN1A2O60476 641 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 PRAMEF4O60810 478 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 SLCO2B1O94956 709 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 POP4O95707 220 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 B3GALT4O96024 378 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 SRCP12931 536 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 ITPKAP23677 461 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 TMED10P49755 219 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 OLR1P78380 273 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 CREMQ03060 361 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 RBBP4Q09028 425 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 ZNF404Q494X3 552 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 PRAMEF9Q5VWM5 478 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 PDE12Q6L8Q7 609 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 AHSA2Q719I0 299 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 CCDC71Q8IV32 467 aaPredicted RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 NPAS3Q8IXF0 933 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 AMER2Q8N7J2 671 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 NAT16Q8N8M0 369 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 KBTBD8Q8NFY9 601 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 PYCR2Q96C36 320 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 DCSTAMPQ9H295 470 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 RUBCNLQ9H714 662 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 CCDC59Q9P031 241 aaKnown RBP16.3■□□□□ 0.2
SNHG17-207ENST00000449469 POFUT2Q9Y2G5 429 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
SNHG17-207ENST00000449469 CPSF4O95639 269 aaKnown RBP16.29■□□□□ 0.2
SNHG17-207ENST00000449469 C1SP09871 688 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 ITGA2P17301 1181 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 LHCGRP22888 699 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 FSHRP23945 695 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 HOXD10P28358 340 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 EIF2DP41214 584 aaKnown RBP16.29■□□□□ 0.2
SNHG17-207ENST00000449469 EIF2B2P49770 351 aaKnown RBP16.29■□□□□ 0.2
SNHG17-207ENST00000449469 SLC7A9P82251 487 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 EIF4HQ15056 248 aaKnown RBP16.29■□□□□ 0.2
SNHG17-207ENST00000449469 XKR6Q5GH73 641 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 DENND6BQ8NEG7 585 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 COQ8BQ96D53 544 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 SLC22A12Q96S37 553 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 HERC2P3Q9BVR0 1158 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 BRD9Q9H8M2 597 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 INIPQ9NRY2 104 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 NFKBIL1Q9UBC1 381 aaPredicted RBP16.29■□□□□ 0.2
SNHG17-207ENST00000449469 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 INSL5Q9Y5Q6 135 aa16.29■□□□□ 0.2
SNHG17-207ENST00000449469 AXIN1O15169 862 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 AQP9O43315 295 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 AIREO43918 545 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 KDM1AO60341 852 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 PSIP1O75475 530 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 DIRAS1O95057 198 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 RPL3P39023 403 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 CTSKP43235 329 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 LSM3P62310 102 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 SELENOWP63302 87 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 KRR1Q13601 381 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 RGNQ15493 299 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 SMN1Q16637 294 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 TOR1AIP1Q5JTV8 583 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 THOC6Q86W42 341 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 REPS1Q96D71 796 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 TPD52L3Q96J77 140 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 RAD9AQ99638 391 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 BHLHE41Q9C0J9 482 aaPredicted RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 RASSF1Q9NS23 344 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 RNF6Q9Y252 685 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 CARNS1A5YM72 827 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 CLCA1A8K7I4 914 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 A8MX80 341 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 UPK1BO75841 260 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 PARNO95453 639 aaKnown RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 CDK1P06493 297 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 LAMP1P11279 417 aa16.28■□□□□ 0.2
SNHG17-207ENST00000449469 CYP2A6P11509 494 aaPredicted RBP16.28■□□□□ 0.2
SNHG17-207ENST00000449469 SERPINB1P30740 379 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms