RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 RHDQ02161 417 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 UGT3A2Q3SY77 523 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 OR4K3Q96R72 315 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 MIR1-1HGQ9H1L0 117 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 RHOJQ9H4E5 214 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TSPAN16Q9UKR8 245 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ZDHHC9Q9Y397 364 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 CDRT1O95170 752 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SGPL1O95470 568 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF286BP0CG31 522 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM35AQ53FP2 167 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 FAM162BQ5T6X4 162 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 RPL13AP3Q6NVV1 102 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 UNC5CLQ8IV45 518 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 THEM6Q8WUY1 208 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 RAB39BQ96DA2 213 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 CELF6Q96J87 481 aaKnown RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF251Q9BRH9 671 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 APMAPQ9HDC9 416 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TVP23BQ9NYZ1 205 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 IGSF9Q9P2J2 1179 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 CDC14AQ9UNH5 594 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TOR1BO14657 336 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 HTR3BO95264 441 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 EPHX2P34913 555 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 HNF1BP35680 557 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 PHYHD1Q5SRE7 291 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ATPAF1Q5TC12 328 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 HIST2H3PS2Q5TEC6 136 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 HECTD2Q5U5R9 776 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SSX7Q7RTT5 188 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SLC29A4Q7RTT9 530 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 KIAA0907Q7Z7F0 614 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ALLCQ8N6M5 410 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM104Q8NE00 496 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 NPLOC4Q8TAT6 608 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 GAB3Q8WWW8 586 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 ZNF701Q9NV72 531 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-202ENST00000448238 TMEM248Q9NWD8 314 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 FNIP2Q9P278 1114 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
NIPBL-202ENST00000448238 M0R2N6 131 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 ETV6P41212 452 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 SPATS1Q496A3 300 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 COQ5Q5HYK3 327 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 KCTD18Q6PI47 426 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 C6orf120Q7Z4R8 191 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 PSD4Q8NDX1 1056 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 OR4K1Q8NGD4 311 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 RSPRY1Q96DX4 576 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 TKTL2Q9H0I9 626 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1W2PQ45 241 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1W2PQY0 241 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 AQP12BA6NM10 295 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 IRF6O14896 467 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 YY2O15391 372 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 LYPLA1O75608 230 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 LTKP29376 864 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 PROKR1Q8TCW9 393 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 TTYH2Q9BSA4 534 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 CENPOQ9BU64 300 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 ACOXLQ9NUZ1 547 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 IMP3Q9NV31 184 aaKnown RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 LUZP4Q9P127 313 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 P2RX2Q9UBL9 471 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 BTRCQ9Y297 605 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 COL17A1Q9UMD9 1497 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 PALLDQ8WX93 1383 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 C5orf60A6NFR6 353 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 IMPA2O14732 288 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 CBSLP0DN79 551 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 CBSP35520 551 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 RAB28P51157 221 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 CLCN2P51788 898 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 HSD17B7P56937 341 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 GK2Q14410 553 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 PYROXD2Q8N2H3 581 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 HOXB13Q92826 284 aaPredicted RBP8.71□□□□□ -1.01
NIPBL-202ENST00000448238 GAL3ST4Q96RP7 486 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 PXMP2Q9NR77 195 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 IL20RAQ9UHF4 553 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 CLCA3PQ9Y6N3 262 aa8.71□□□□□ -1.01
NIPBL-202ENST00000448238 A0A1W2PPV4 95 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 TPPPO94811 219 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 IL33O95760 270 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 ANXA4P09525 319 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 MALLQ13021 153 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC8B1Q6J4K2 584 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 KIAA1324Q6UXG2 1013 aaKnown RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 STRADAQ7RTN6 431 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 RBMXL1Q96E39 390 aaKnown RBP8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC35G5Q96KT7 338 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 UHRF2Q96PU4 802 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 TUBE1Q9UJT0 475 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 TMEM14AQ9Y6G1 99 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 PROM1O43490 865 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 SLC18A2Q05940 514 aa8.71□□□□□ -1.02
NIPBL-202ENST00000448238 CDNFQ49AH0 187 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms