RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 ZNF552Q9H707 407 aaPredicted RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 GPAMQ9HCL2 828 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 IKZF3Q9UKT9 509 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 NOVA2Q9UNW9 492 aaKnown RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 DCHS2Q6V1P9 2916 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 CCDC168Q8NDH2 2452 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 TACC2O95359 2948 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 ABCA2Q9BZC7 2435 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 TMEM150CB9EJG8 249 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 IPO13O94829 963 aaKnown RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 ENO2P09104 434 aaPredicted RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 HIST1H2AGP0C0S8 130 aaPredicted RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 STMN1P16949 149 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 HIST1H2ADP20671 130 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 CMPK1P30085 196 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 RPA3P35244 121 aaPredicted RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 AP1S2P56377 157 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 YBX1P67809 324 aaKnown RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 ZNF460Q14592 562 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 MYBPC3Q14896 1274 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 EFTUD2Q15029 972 aaKnown RBP eCLIP11.88□□□□□ -0.51
SSR4-205ENST00000447375 ZKSCAN8Q15776 578 aaPredicted RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 UBAP2Q5T6F2 1119 aaKnown RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 SBSNQ6UWP8 590 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 MRGPRGQ86SM5 289 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
SSR4-205ENST00000447375 GALNT16Q8N428 558 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 SLC38A9Q8NBW4 561 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 PPFIBP2Q8ND30 876 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 FAR1Q8WVX9 515 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 HIST1H2AHQ96KK5 128 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 LRFN5Q96NI6 719 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 HIST1H2AJQ99878 128 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 H2AFJQ9BTM1 129 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 ACAT2Q9BWD1 397 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 TRIM54Q9BYV2 358 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 CAB39LQ9H9S4 337 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 ENAMQ9NRM1 1142 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
SSR4-205ENST00000447375 IGKV1-8A0A0C4DH67 115 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 OR2A25A4D2G3 310 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ESPNB1AK53 854 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 E7EQ34 232 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 MEN1O00255 615 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 CDC7O00311 574 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 CTSVO60911 334 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 OR2B3O76000 313 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ACSL3O95573 720 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 CD1EP15812 388 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 RAB10P61026 200 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ABATP80404 500 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 RELAQ04206 551 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 PPP1R3AQ16821 1122 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ZC3H12BQ5HYM0 836 aaKnown RBP11.87□□□□□ -0.51
SSR4-205ENST00000447375 ICE2Q659A1 982 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 AGTRAPQ6RW13 159 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 MBOAT1Q6ZNC8 495 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 RAB43Q86YS6 212 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 GPR135Q8IZ08 494 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 CLEC1AQ8NC01 280 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 N4BP2L2Q92802 583 aaPredicted RBP11.87□□□□□ -0.51
SSR4-205ENST00000447375 UBXN10Q96LJ8 280 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 FER1L6-AS2Q96M78 137 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ZNF285Q96NJ3 590 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 DPH7Q9BTV6 452 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 SGPP1Q9BX95 441 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 DERL2Q9GZP9 239 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 SPRTNQ9H040 489 aaPredicted RBP11.87□□□□□ -0.51
SSR4-205ENST00000447375 PCBD2Q9H0N5 130 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ZBTB20Q9HC78 741 aaPredicted RBP11.87□□□□□ -0.51
SSR4-205ENST00000447375 SLC6A20Q9NP91 592 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 ARL15Q9NXU5 204 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 TAC3Q9UHF0 121 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 AP1M2Q9Y6Q5 423 aa11.87□□□□□ -0.51
SSR4-205ENST00000447375 PCM1Q15154 2024 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 HMX2A2RU54 273 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 PHGDHO43175 533 aaKnown RBP11.86□□□□□ -0.51
SSR4-205ENST00000447375 ZNF749O43361 778 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
SSR4-205ENST00000447375 CCNDBP1O95273 360 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 CTSBP07858 339 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 FAM153BP0C7A2 387 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 CCDC166P0CW27 439 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 CCND1P24385 295 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 CRABP2P29373 138 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 RORAP35398 523 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 CDKL1Q00532 357 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 NAE1Q13564 534 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 TSTA3Q13630 321 aaPredicted RBP11.86□□□□□ -0.51
SSR4-205ENST00000447375 DEFB110Q30KQ9 67 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 FAM153CQ494X1 144 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 PRAMEF17Q5VTA0 474 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 ZNF425Q6IV72 752 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 FBXO42Q6P3S6 717 aa11.86□□□□□ -0.51
SSR4-205ENST00000447375 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
SSR4-205ENST00000447375 DSELQ8IZU8 1212 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms