RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CLCNKBP51801 687 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 CDH11P55287 796 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 PRMT2P55345 433 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 DNAJB13P59910 316 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 STXBP1P61764 594 aaKnown RBP18.11■□□□□ 0.49
SHANK3-203ENST00000445220 PIGFQ07326 219 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 FADDQ13158 208 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 TOMM20Q15388 145 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 KLHL26Q53HC5 615 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 FAM110BQ8TC76 370 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 PCED1BQ96HM7 432 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 MTERF1Q99551 399 aaKnown RBP18.11■□□□□ 0.49
SHANK3-203ENST00000445220 SMOXQ9NWM0 555 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 SOHLH2Q9NX45 425 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 EXOSC1Q9Y3B2 195 aaKnown RBP18.11■□□□□ 0.49
SHANK3-203ENST00000445220 HCN4Q9Y3Q4 1203 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 PCDHGC4Q9Y5F7 938 aa18.11■□□□□ 0.49
SHANK3-203ENST00000445220 LOC100509620A0A075B734 347 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 GRK6P43250 576 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 DSG2Q14126 1118 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 ABHD11Q8NFV4 315 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 C2orf15Q8WU43 125 aaKnown RBP18.1■□□□□ 0.49
SHANK3-203ENST00000445220 ACTR6Q9GZN1 396 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 CFAP97Q9P2B7 532 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 KRBA1A5PL33 1030 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 KRT33AO76009 404 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 PLATP00750 562 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 EDNRAP25101 427 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 MAP3K8P41279 467 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 HNRNPFP52597 415 aaKnown RBP18.1■□□□□ 0.49
SHANK3-203ENST00000445220 PRKCDQ05655 676 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 PNCKQ6P2M8 343 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 TMED4Q7Z7H5 227 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 RHBDF1Q96CC6 855 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 S100A16Q96FQ6 103 aaKnown RBP18.1■□□□□ 0.49
SHANK3-203ENST00000445220 MS4A12Q9NXJ0 267 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 GALPQ9UBC7 116 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 VPS29Q9UBQ0 182 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 EVLQ9UI08 416 aaPredicted RBP18.1■□□□□ 0.49
SHANK3-203ENST00000445220 LTN1O94822 1766 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 NT5EP21589 574 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 ASPAP45381 313 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 SLC3A1Q07837 685 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 CLCA4Q14CN2 919 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 XKR4Q5GH76 650 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 NCBP2-AS2Q69YL0 99 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 ALPK1Q96QP1 1244 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 PTPRJQ12913 1337 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 NUAK1O60285 661 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 FAM163BP0C2L3 166 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 ZNF3P17036 446 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 NSG1P42857 185 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 CTBP2P56545 445 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 SEC23BQ15437 767 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 WDR45BQ5MNZ6 344 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 DEDD2Q8WXF8 326 aa18.1■□□□□ 0.49
SHANK3-203ENST00000445220 TP63Q9H3D4 680 aaPredicted RBP18.1■□□□□ 0.49
SHANK3-203ENST00000445220 IMP3Q9NV31 184 aaKnown RBP18.1■□□□□ 0.49
SHANK3-203ENST00000445220 ELOA3DA6NLF2 546 aaPredicted RBP18.09■□□□□ 0.49
SHANK3-203ENST00000445220 EOMESO95936 686 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 G6PDP11413 515 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 ATXN1P54253 815 aaKnown RBP18.09■□□□□ 0.49
SHANK3-203ENST00000445220 TAS2R43P59537 309 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 EMX2Q04743 252 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 PMS2P3Q13401 168 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 ELOA3BQ3SY89 546 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 ABCA11PQ4W5N1 156 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 ATXN7L2Q5T6C5 722 aaPredicted RBP18.09■□□□□ 0.49
SHANK3-203ENST00000445220 ELOA3Q8NG57 546 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SLC29A3Q9BZD2 475 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 B3GNT4Q9C0J1 378 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 CDH10Q9Y6N8 788 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SMIM30A4D0T7 59 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 AP1S1P61966 158 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 NATD1Q8N6N6 113 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SACM1LQ9NTJ5 587 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 TFPIP10646 304 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 KCNA5P22460 613 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 VAMP2P63027 116 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 CDK6Q00534 326 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 TOR1AIP1Q5JTV8 583 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SNAP47Q5SQN1 464 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SLC7A5P1Q8MH63 180 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 OR10T2Q8NGX3 314 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 CD300LFQ8TDQ1 290 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 FUBP3Q96I24 572 aaKnown RBP eCLIP18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SIGLEC10Q96LC7 697 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 DNAJC27Q9NZQ0 273 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 PPM1BO75688 479 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 KAT7O95251 611 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 RORAP35398 523 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 VLDLRP98155 873 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 E2F1Q01094 437 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 SF1Q15637 639 aaKnown RBP18.09■□□□□ 0.49
SHANK3-203ENST00000445220 IQCHQ86VS3 1027 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 DENND1AQ8TEH3 1009 aa18.09■□□□□ 0.49
SHANK3-203ENST00000445220 MAGED1Q9Y5V3 778 aaPredicted RBP18.09■□□□□ 0.49
SHANK3-203ENST00000445220 VNN1O95497 513 aa18.08■□□□□ 0.49
SHANK3-203ENST00000445220 OR4Q2P0C623 313 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms