RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TCTE1Q5JU00 501 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 NXPE4Q6UWF7 544 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 FAM20CQ8IXL6 584 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 IL17RCQ8NAC3 791 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 MRGPRX1Q96LB2 322 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 PKP4Q99569 1192 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 LRIT1Q9P2V4 623 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 CPNE7Q9UBL6 633 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 EPHA6Q9UF33 1036 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 EGFL7Q9UHF1 273 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ZDHHC2Q9UIJ5 367 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 MAGEL2Q9UJ55 1249 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 HS3ST3A1Q9Y663 406 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ZCCHC18P0CG32 403 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 BMP8BP34820 402 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 PRLHRP49683 370 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 CLNKQ7Z7G1 428 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 ZSCAN1Q8NBB4 408 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 C6orf106Q9H6K1 298 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM184CQ9NVA4 438 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 FAM234BA2RU67 622 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 A8MUI8 341 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 TMX2-CTNND1H3BSU7 103 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 GBAP04062 536 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 KRR1Q13601 381 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 DOC2AQ14183 400 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 TRIM16LQ309B1 348 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 PADI2Q9Y2J8 665 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 RYKP34925 604 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 KHKP50053 298 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 RGS8P57771 180 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 RFLNAQ6ZTI6 216 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 RNF44Q7L0R7 432 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 SCAIQ8N9R8 606 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 MRPL48Q96GC5 212 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 PLA2G2FQ9BZM2 168 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM27Q9HBJ8 222 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 STOX2Q9P2F5 926 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 IFT80Q9P2H3 777 aaPredicted RBP13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 RAPGEFL1Q9UHV5 662 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 GTF2A1LQ9UNN4 478 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 TTC3P53804 2025 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 FOCADQ5VW36 1801 aa13.62□□□□□ -0.23
SMARCA4-204ENST00000444061 KRT33AO76009 404 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 RPS15P62841 145 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 PTSQ03393 145 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 PTPRRQ15256 657 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 POMGNT2Q8NAT1 580 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 SMRP1Q8NCR6 262 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 BTBD9Q96Q07 612 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 MCM8Q9UJA3 840 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DLGAP4Q9Y2H0 992 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 GREB1LQ9C091 1923 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DFNA5O60443 496 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 LDOC1O95751 146 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 ALOX5P09917 674 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 FBLP22087 321 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TAS2R41P59536 307 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 RIPK1Q13546 671 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 PRSS36Q5K4E3 855 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 OR52L1Q8NGH7 329 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 FBXL8Q96CD0 374 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 PTCHD1Q96NR3 888 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 PRTFDC1Q9NRG1 225 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TRNAU1APQ9NX07 287 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 KLHL42Q9P2K6 505 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 ATP5A1P25705 553 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 S100A5P33763 92 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 LRIT3Q3SXY7 679 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 POMZP3Q6PJE2 187 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 ADAMTSL4Q6UY14 1074 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 Q6ZS52 159 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 PLEKHM3Q6ZWE6 761 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 RASGEF1AQ8N9B8 481 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 OR13H1Q8NG92 308 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM168Q9H0V1 697 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 ACTR10Q9NZ32 417 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 OAS3Q9Y6K5 1087 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 COQ9O75208 318 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 KCNC1P48547 511 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 MTTPP55157 894 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DCDC1P59894 354 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 DLX2Q07687 328 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 KIR2DS3Q14952 304 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 KCTD11Q693B1 232 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TNFAIP8L2Q6P589 184 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 LRRC74BQ6ZQY2 392 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 TICAM1Q8IUC6 712 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 FAM160A2Q8N612 972 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 MYEOVQ96EZ4 313 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 KCNC2Q96PR1 638 aa13.61□□□□□ -0.23
SMARCA4-204ENST00000444061 RBCK1Q9BYM8 510 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms