RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 NCOA7Q8NI08 942 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 DNASE1L2Q92874 299 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 KRT12Q99456 494 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 EGLN3Q9H6Z9 239 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 MINDY3Q9H8M7 445 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 RAB9BQ9NP90 201 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 MRGBPQ9NV56 204 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 ELF5Q9UKW6 265 aaPredicted RBP4.23□□□□□ -1.73
PFDN4-202ENST00000441080 RUVBL2Q9Y230 463 aaKnown RBP4.23□□□□□ -1.73
PFDN4-202ENST00000441080 SELENOKQ9Y6D0 94 aa4.23□□□□□ -1.73
PFDN4-202ENST00000441080 PRSS46E5RG02 174 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 PSMA7O14818 248 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 SELENOFO60613 162 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 GAS8-AS1O95177 125 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 RLN1P04808 185 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 YES1P07947 543 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 CYP2A7P20853 494 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 HLA-FP30511 346 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 SSTR1P30872 391 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 SOAT1P35610 550 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 OR3A2P47893 321 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
PFDN4-202ENST00000441080 DCDC1P59894 354 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 IRX1P78414 480 aaPredicted RBP4.22□□□□□ -1.73
PFDN4-202ENST00000441080 CDH18Q13634 790 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 FGD3Q5JSP0 725 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 FAM46CQ5VWP2 391 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 OR4C11Q6IEV9 310 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 CPEB2Q7Z5Q1 589 aaKnown RBP4.22□□□□□ -1.73
PFDN4-202ENST00000441080 TICAM2Q86XR7 235 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 CROCCP3Q8IVE0 287 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 GOT1L1Q8NHS2 421 aaPredicted RBP4.22□□□□□ -1.73
PFDN4-202ENST00000441080 WBP2Q969T9 261 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 USP28Q96RU2 1077 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 PI4K2AQ9BTU6 479 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 TDRD1Q9BXT4 1180 aaKnown RBP4.22□□□□□ -1.73
PFDN4-202ENST00000441080 ZDHHC18Q9NUE0 388 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.22□□□□□ -1.73
PFDN4-202ENST00000441080 TBC1D13Q9NVG8 400 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 DNAJB9Q9UBS3 223 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 SLC12A6Q9UHW9 1150 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 ITGA11Q9UKX5 1188 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 COLEC10Q9Y6Z7 277 aa4.22□□□□□ -1.73
PFDN4-202ENST00000441080 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 YDJCA8MPS7 323 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 IFIT3O14879 490 aaKnown RBP4.21□□□□□ -1.74
PFDN4-202ENST00000441080 DUS4LO95620 317 aaKnown RBP4.21□□□□□ -1.74
PFDN4-202ENST00000441080 MOCS2O96007 188 aaPredicted RBP4.21□□□□□ -1.74
PFDN4-202ENST00000441080 IGHEP01854 428 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 CD59P13987 128 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 DUTP33316 252 aaKnown RBP4.21□□□□□ -1.74
PFDN4-202ENST00000441080 SOX3P41225 446 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 TSFMP43897 325 aaKnown RBP4.21□□□□□ -1.74
PFDN4-202ENST00000441080 CLDN17P56750 224 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 DRP2Q13474 957 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 TAB1Q15750 504 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 ZRANB3Q5FWF4 1079 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 CASC4Q6P4E1 433 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 Q6ZRP5 223 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 GPR141Q7Z602 305 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 PRUNE1Q86TP1 453 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 PRSS35Q8N3Z0 413 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 TCEANCQ8N8B7 351 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 RBM41Q96IZ5 413 aaKnown RBP4.21□□□□□ -1.74
PFDN4-202ENST00000441080 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 SPHK2Q9NRA0 654 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 HACD3Q9P035 362 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 AGTPBP1Q9UPW5 1226 aa4.21□□□□□ -1.74
PFDN4-202ENST00000441080 TRAV18A0A075B6X5 111 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 MTMR11A4FU01 709 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 SLC30A4O14863 429 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 SLU7O95391 586 aaKnown RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 ANKRD34CP0C6C1 535 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 SUPT20HL2P0C7V6 817 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 AADACP22760 399 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 RBMS1P29558 406 aaKnown RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 CYCSP99999 105 aaKnown RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 NHSL2Q5HYW2 709 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 PRSS55Q6UWB4 352 aaPredicted RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 ZNF497Q6ZNH5 498 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 NHLRC2Q8NBF2 726 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 OR5T2Q8NGG2 359 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 ZNF519Q8TB69 540 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 SLCO2A1Q92959 643 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 POM121L2Q96KW2 1035 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 LINC00479Q96M42 142 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 MLPHQ9BV36 600 aaPredicted RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 IARS2Q9NSE4 1012 aaKnown RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 PANK4Q9NVE7 773 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 ARMCX3Q9UH62 379 aaPredicted RBP4.2□□□□□ -1.74
PFDN4-202ENST00000441080 GMEB2Q9UKD1 530 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 PILRBQ9UKJ0 227 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 KLK4Q9Y5K2 254 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 CSNK1G3Q9Y6M4 447 aa4.2□□□□□ -1.74
PFDN4-202ENST00000441080 E5RGE8 158 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 NPIPA3F8WFD2 350 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 H3BMM5 538 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 SLC1A7O00341 560 aa4.19□□□□□ -1.74
PFDN4-202ENST00000441080 ST8SIA3O43173 380 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms