RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SMARCD1Q96GM5 515 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TSGA13Q96PP4 275 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM111AQ96PZ2 611 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM237Q96Q45 408 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAB3IPQ96QF0 476 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KCNK16Q96T55 309 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 VAT1Q99536 393 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SCNM1Q9BWG6 230 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TSSK1BQ9BXA7 367 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TKTL2Q9H0I9 626 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 UGT1A7Q9HAW7 530 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 UGT1A10Q9HAW8 530 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 UGT1A8Q9HAW9 530 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PLAC1Q9HBJ0 212 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CSNK1G1Q9HCP0 422 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 WDR6Q9NNW5 1121 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLCO1B3Q9NPD5 702 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 DMAP1Q9NPF5 467 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FZD3Q9NPG1 666 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SAR1AQ9NR31 198 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ABCC13Q9NSE7 274 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 DDIT4Q9NX09 232 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BFARQ9NZS9 450 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SELENONQ9NZV5 590 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KLHL8Q9P2G9 620 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBC1D14Q9P2M4 693 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 DCDC2Q9UHG0 476 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BAIAP2L1Q9UHR4 511 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PADI3Q9ULW8 664 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CHKBQ9Y259 395 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 MFHAS1Q9Y4C4 1052 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PCDHB7Q9Y5E2 793 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PIAS3Q9Y6X2 628 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PLXNA1Q9UIW2 1896 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 A0A0G2JND7 137 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SYNDIG1LA6NDD5 238 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGAP42A6NI28 874 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM90A7PA6NKC0 464 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM90A22PA8MWA6 464 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM90A12PA8MX19 464 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM90A23PA8MXZ1 464 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 KCNK1O00180 336 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PEX12O00623 359 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRAFD1O14545 582 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TLX3O43711 291 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 GLRA3O75311 464 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 B3GAT3O94766 335 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 AP2A1O95782 977 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 JCHAINP01591 159 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ALPLP05186 524 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ATP5BP06576 529 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ASGR1P07306 291 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 BPGMP07738 259 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 MYL2P10916 166 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACADMP11310 421 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACP5P13686 325 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCNCP24863 283 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PTPN4P29074 926 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TYK2P29597 1187 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPRP35270 261 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 HTR6P50406 440 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 GTF2A1P52655 376 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPP30P78346 268 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PDE1BQ01064 536 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TSPY1Q01534 308 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZBTB16Q05516 673 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF33AQ06730 810 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 NIPAL4Q0D2K0 466 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 BST1Q10588 318 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CDH17Q12864 832 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 OVGP1Q12889 678 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 STX3Q13277 289 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 FRG1Q14331 258 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 LPIN1Q14693 890 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CRYMQ14894 314 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 INPP5JQ15735 1006 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CHI3L2Q15782 390 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 AAK1Q2M2I8 961 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 BRMS1LQ5PSV4 323 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 WLSQ5T9L3 541 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 NAPEPLDQ6IQ20 393 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 GRHL2Q6ISB3 625 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC144NLQ6NUI1 221 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CD300LGQ6UXG3 332 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PACS1Q6VY07 963 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CDHR3Q6ZTQ4 885 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 LINC00523Q86TU6 105 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM135Q86UB9 458 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 LONP2Q86WA8 852 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CEP57Q86XR8 500 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 CRLF3Q8IUI8 442 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPATA2LQ8IUW3 424 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 DCP1BQ8IZD4 617 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 KIF2BQ8N4N8 673 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 PTGR2Q8N8N7 351 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 DNAAF3Q8N9W5 541 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 SRFBP1Q8NEF9 429 aaKnown RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF548Q8NEK5 533 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 OR52K1Q8NGK4 314 aa3.38□□□□□ -1.87
HMGB3P11-201ENST00000440127 RFWD2Q8NHY2 731 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms