RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CRB3Q9BUF7 120 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 SARGQ9BW04 601 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 CDC42EP4Q9H3Q1 356 aaKnown RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 SOX17Q9H6I2 414 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 PELI2Q9HAT8 420 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 MKKSQ9NPJ1 570 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-216ENST00000439475 C14orf105Q9NVL8 296 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 P4HTMQ9NXG6 502 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 GPR83Q9NYM4 423 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 NINJ2Q9NZG7 142 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 GPRC5BQ9NZH0 403 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 TRPC4Q9UBN4 977 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 RNF112Q9ULX5 631 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 TP53TG5Q9Y2B4 290 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 MAP4K5Q9Y4K4 846 aa9.96□□□□□ -0.82
MCF2L-216ENST00000439475 BPTFQ12830 3046 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 IGLV3-12A0A075B6K2 115 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 A0A087X1B8 175 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 A0A0A6YYC8 382 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 CCDC189A1A4V9 331 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 NCF1BA6NI72 391 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 A6NL46 340 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 SYCE1LA8MT33 242 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 NCF1CA8MVU1 366 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 I3L1I5 382 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 J3QKU1 62 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 CLGNO14967 610 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 SUV39H1O43463 412 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 LCMT2O60294 686 aaKnown RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 DNAJB5O75953 348 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 WISP3O95389 354 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 NSA2O95478 260 aaKnown RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 SERPIND1P05546 499 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 HEXBP07686 556 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 LTA4HP09960 611 aaKnown RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 C1GALT1C1LP0DN25 315 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 NCF1P14598 390 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TYK2P29597 1187 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 HPDP32754 393 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 AHRP35869 848 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 SERPINB9P50453 376 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 AIMP2Q13155 320 aaKnown RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 ATP1A4Q13733 1029 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 RBBP5Q15291 538 aaKnown RBP9.95□□□□□ -0.82
MCF2L-216ENST00000439475 FAM83EQ2M2I3 478 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 VWA2Q5GFL6 755 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 CATSPEREQ5SY80 951 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 MROH9Q5TGP6 573 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 FAM69BQ5VUD6 431 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 KLC3Q6P597 504 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 NXPE4Q6UWF7 544 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 COX15Q7KZN9 410 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 MRGPREQ86SM8 312 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TMPRSS11BQ86T26 416 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 CNPY4Q8N129 248 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 KRT78Q8N1N4 520 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TTLQ8NG68 377 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TM9SF4Q92544 642 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 NEIL2Q969S2 332 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TM4SF19Q96DZ7 209 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 UBXN10Q96LJ8 280 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 OR4K3Q96R72 315 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TRIM55Q9BYV6 548 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 TGIF2Q9GZN2 237 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 CD274Q9NZQ7 290 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 C5AR2Q9P296 337 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 ZFP69BQ9UJL9 534 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 C3orf18Q9UK00 162 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 IKZF3Q9UKT9 509 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 SLC22A7Q9Y694 548 aa9.95□□□□□ -0.82
MCF2L-216ENST00000439475 A0A087WUV0 522 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 MAP2K7O14733 419 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 NDUFS4O43181 175 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 FOXS1O43638 330 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 DPM1O60762 260 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 CNOT3O75175 753 aaKnown RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 STK16O75716 305 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 CEACAM4O75871 244 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 FAM155BO75949 473 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 KRT38O76015 456 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 ACSL3O95573 720 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 ALPPP05187 535 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 C2P06681 752 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 UMODP07911 640 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 TFEBP19484 476 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 IL10P22301 178 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 CNTFP26441 200 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 GSTM2P28161 218 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 GGT5P36269 586 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 BCL6P41182 706 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 MSH2P43246 934 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 SCTRP47872 440 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 KLC1Q07866 573 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 CDC16Q13042 620 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 HERC3Q15034 1050 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 HIST2H2ACQ16777 129 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 ZXDCQ2QGD7 858 aaPredicted RBP9.94□□□□□ -0.82
MCF2L-216ENST00000439475 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 DCAF10Q5QP82 559 aa9.94□□□□□ -0.82
MCF2L-216ENST00000439475 CPZQ66K79 652 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms