RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 COL1A1P02452 1464 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 SPTBN4Q9H254 2564 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 FASNP49327 2511 aaKnown RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF318Q5VUA4 2279 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 CFAP54Q96N23 3096 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TPRP12270 2363 aaKnown RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TMEM221A6NGB7 291 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 H7C0S8 307 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 M0R296 226 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 DNM1LO00429 736 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 GAPDHSO14556 408 aaPredicted RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 PENKP01210 267 aaPredicted RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 DANCRP0C864 163 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 PRSS56P0CW18 603 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ERCC2P18074 760 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ACHEP22303 614 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 NBL1P41271 181 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCR10P46092 362 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 PDX1P52945 283 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 RAD23AP54725 363 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 RBPJQ06330 500 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ACSM1Q08AH1 577 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 COG2Q14746 738 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZC2HC1CQ53FD0 456 aaPredicted RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 DCAF10Q5QP82 559 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 FAM53AQ6NSI3 398 aaPredicted RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 MFSD12Q6NUT3 480 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 DET1Q7L5Y6 550 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 CHST3Q7LGC8 479 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANKRD23Q86SG2 305 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF554Q86TJ5 538 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TRPT1Q86TN4 253 aaKnown RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TMEM139Q8IV31 216 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 MFN1Q8IWA4 741 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 STPG4Q8N801 248 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TRIML1Q8N9V2 468 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 CAMKVQ8NCB2 501 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 KBTBD8Q8NFY9 601 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 OR1J1Q8NGS3 322 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 CTCFLQ8NI51 663 aaPredicted RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 OLIG1Q8TAK6 271 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 FGFBP3Q8TAT2 258 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 SSMEM1Q8WWF3 244 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 IRGQQ8WZA9 623 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TM9SF4Q92544 642 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TMEM143Q96AN5 459 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 OTUB1Q96FW1 271 aaPredicted RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 NSL1Q96IY1 281 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 FER1L6-AS2Q96M78 137 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZMAT2Q96NC0 199 aaKnown RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 RHNO1Q9BSD3 238 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 BTBD10Q9BSF8 475 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 NUP85Q9BW27 656 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 MTIF3Q9H2K0 278 aaKnown RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 PIH1D3Q9NQM4 214 aaKnown RBP3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ECHDC1Q9NTX5 307 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 MUTYHQ9UIF7 546 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANAPC5Q9UJX4 755 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 MTUS1Q9ULD2 1270 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 TMED3Q9Y3Q3 217 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCL27Q9Y4X3 112 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 RIPK3Q9Y572 518 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 MTCH2Q9Y6C9 303 aa3□□□□□ -1.93
HMGB3P12-201ENST00000438745 NCOR2Q9Y618 2525 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 GAKO14976 1311 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 CLRN2A0PK11 232 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 KBTBD13C9JR72 458 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 UFL1O94874 794 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 HSPA4LO95757 839 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 TSHBP01222 138 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 RAB40ALP0C0E4 278 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 CCDC175P0C221 793 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 FDPSP14324 419 aaKnown RBP2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 GNB3P16520 340 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ALDH4A1P30038 563 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 HSPA4P34932 840 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 MZT1Q08AG7 82 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF415Q09FC8 603 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 VGLL4Q14135 290 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 PTPRCAPQ14761 206 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 PSMD6Q15008 389 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 UGP2Q16851 508 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ELFN2Q5R3F8 820 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZC2HC1BQ5TFG8 222 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 PPP1R21Q6ZMI0 780 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 NUP54Q7Z3B4 507 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 PPP1R42Q7Z4L9 355 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ERO1BQ86YB8 467 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 PLD3Q8IV08 490 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANKRD13CQ8N6S4 541 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 PPFIBP2Q8ND30 876 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 OR11H4Q8NGC9 324 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 KIF18AQ8NI77 898 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 SLC47A1Q96FL8 570 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 SGK494Q96LW2 274 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 ASCL2Q99929 193 aa2.99□□□□□ -1.93
HMGB3P12-201ENST00000438745 EGLN1Q9GZT9 426 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms