RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ATP6V1E2Q96A05 226 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 SH3KBP1Q96B97 665 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 WDR34Q96EX3 536 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CCDC74BQ96LY2 380 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 HAUS8Q9BT25 410 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TMPRSS13Q9BYE2 586 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 NSRP1Q9H0G5 558 aaKnown RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TUBB1Q9H4B7 451 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ACTR8Q9H981 624 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 UCK1Q9HA47 277 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 NLGN3Q9NZ94 848 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 GPRC5BQ9NZH0 403 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 OR6C2Q9NZP2 312 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 KLHL14Q9P2G3 628 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TAC3Q9UHF0 121 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TRPS1Q9UHF7 1281 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 GMEB2Q9UKD1 530 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 STK38LQ9Y2H1 464 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 FIS1Q9Y3D6 152 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TIMM22Q9Y584 194 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 DNAJC15Q9Y5T4 150 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 KCNE2Q9Y6J6 123 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 USH1CQ9Y6N9 552 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 RNF215Q9Y6U7 377 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 PLXND1Q9Y4D7 1925 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TRPM6Q9BX84 2022 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 IGKV1-8A0A0C4DH67 115 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 LY6G6EA0A0G2JKS1 128 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 OR6C74A6NCV1 312 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SLCO1B7G3V0H7 640 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 MANBAO00462 879 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 NDUFAB1O14561 156 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 CLGNO14967 610 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 HDAC3O15379 428 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 YKT6O15498 198 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 PCDHGA12O60330 932 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 UGDHO60701 494 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 DEAF1O75398 565 aaPredicted RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 RFPL3O75679 317 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ENO1P06733 434 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 RETP07949 1114 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SYPP08247 313 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 C1GALT1C1LP0DN25 315 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 TROVE2P10155 538 aaKnown RBP eCLIP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 UROSP10746 265 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 CDH1P12830 882 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 HGFP14210 728 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 JUPP14923 745 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 GNAZP19086 355 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 NTF4P34130 210 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ARL1P40616 181 aaPredicted RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 HTR6P50406 440 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 CCT8P50990 548 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 NEK2P51955 445 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 CCNG1P51959 295 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 HK2P52789 917 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 IRF8Q02556 426 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 BTKQ06187 659 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 PRDX1Q06830 199 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 TUBB3Q13509 450 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 PLCL1Q15111 1095 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ZRSR2Q15696 482 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 TBCCQ15814 346 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 GGTA1PQ4G0N0 100 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC9B1Q4ZJI4 515 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 XKR6Q5GH73 641 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 THEMIS2Q5TEJ8 643 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 LIPJQ5W064 366 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ICE2Q659A1 982 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ATG9BQ674R7 924 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 EPGNQ6UW88 154 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 FAM129CQ86XR2 697 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 FAM20CQ8IXL6 584 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC35F3Q8IY50 421 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 AVL9Q8NBF6 648 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ABHD11Q8NFV4 315 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 OR2L3Q8NG85 312 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 OR4K1Q8NGD4 311 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 OR4C6Q8NH72 309 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 METTL6Q8TCB7 284 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 C10orf82Q8WW14 230 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SLC5A11Q8WWX8 675 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 NINJ1Q92982 152 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 PTCD3Q96EY7 689 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 FAR2Q96K12 515 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 C3orf30Q96M34 536 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 FANCD2OSQ96PS1 177 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 OR2A14Q96R47 310 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 EBF4Q9BQW3 602 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 ACAT2Q9BWD1 397 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 GTPBP2Q9BX10 602 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 TBC1D10AQ9BXI6 508 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 TMEM120AQ9BXJ8 343 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 NUSAP1Q9BXS6 441 aaKnown RBP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 NUF2Q9BZD4 464 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 PCBD2Q9H0N5 130 aa6.76□□□□□ -1.33
LSM3P3-201ENST00000436601 SPNS1Q9H2V7 528 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms