RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 HEATR5BQ9P2D3 2071 aa5.51□□□□□ -1.53
HMGB3P24-201ENST00000433260 A0A087X1B8 175 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 A0A096LPK6 155 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 A0A0A6YYC8 382 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 EXOC1LA0A1B0GW35 172 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ARGFXA6NJG6 315 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 EIF4E1BA6NMX2 242 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 FOXO6A8MYZ6 492 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 TRIM49D1C9J1S8 452 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 C9J4A7 227 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 I3L1I5 382 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 UBXN8O00124 270 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MASP2O00187 686 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CLGNO14967 610 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 DSCR3O14972 297 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 P2RX6O15547 441 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RIPK2O43353 540 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF500O60304 480 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CCNT2O60583 730 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 H2AFYO75367 372 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 WDR47O94967 919 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 FKBP9O95302 570 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 WISP3O95389 354 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLU7O95391 586 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PDGFAP04085 211 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 S100BP04271 92 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CAPN1P07384 714 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 INHBAP08476 426 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 LTA4HP09960 611 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 FAM87AP0C7U9 286 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MSL3P1P0C860 447 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLC35E2BP0CK96 405 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MYBL2P10244 700 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 BMP4P12644 408 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CCND1P24385 295 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CRABP2P29373 138 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 OTX2P32243 289 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 GRK3P35626 688 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 HNF4AP41235 474 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CCR10P46092 362 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 HSPA7P48741 367 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 AP1S2P56377 157 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ATP6V0D1P61421 351 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SNRPNP63162 240 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CSNK1G2P78368 415 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MC1RQ01726 317 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RHDQ02161 417 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CDC20Q12834 499 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CHAF1BQ13112 559 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 NAB1Q13506 487 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RBBP5Q15291 538 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 TGFBIQ15582 683 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZKSCAN8Q15776 578 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PPP1R3AQ16821 1122 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SYT16Q17RD7 645 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 NKAIN1Q4KMZ8 207 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 VWA2Q5GFL6 755 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF385CQ66K41 422 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RHBDD2Q6NTF9 364 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PCSK4Q6UW60 755 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RNF44Q7L0R7 432 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 TRMT10CQ7L0Y3 403 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ISCA2Q86U28 154 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PRSS58Q8IYP2 241 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SHISA5Q8N114 240 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PLD6Q8N2A8 252 aaKnown RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CSNK1A1LQ8N752 337 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 EXD3Q8N9H8 876 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SNX31Q8N9S9 440 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 KCT2Q8NC54 265 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF740Q8NDX6 193 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR56A3Q8NH54 315 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 STAG3L4Q8TBR4 150 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 DCAKDQ8WVC6 231 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SLC5A11Q8WWX8 675 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ATL1Q8WXF7 558 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ANKRD7Q92527 254 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 TTC9Q92623 222 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 NEIL2Q969S2 332 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PTERQ96BW5 349 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZBTB9Q96C00 473 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 RHBDF1Q96CC6 855 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MOCOSQ96EN8 888 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 MMABQ96EY8 250 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SCYL1Q96KG9 808 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 LRFN5Q96NI6 719 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 GBP5Q96PP8 586 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR2A5Q96R48 311 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 UBL7Q96S82 380 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PAFAH2Q99487 392 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SGPP1Q9BX95 441 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 GPR87Q9BY21 358 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 NLNQ9BYT8 704 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 FAM129AQ9BZQ8 928 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 DERL2Q9GZP9 239 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 CHRNA10Q9GZZ6 450 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 PCBD2Q9H0N5 130 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SPNS1Q9H2V7 528 aa5.5□□□□□ -1.53
HMGB3P24-201ENST00000433260 SOX17Q9H6I2 414 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms