RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 RASGEF1CQ8N431 466 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 TBC1D19Q8N5T2 526 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 LINC01555Q8NAE3 123 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 OR2L3Q8NG85 312 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 MIEF2Q96C03 454 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 SDCCAG3Q96C92 435 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 THOC3Q96J01 351 aaKnown RBP9.76□□□□□ -0.85
HOXD3-203ENST00000432796 HIST1H2AHQ96KK5 128 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 SERPINB12Q96P63 405 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 HIST1H2AJQ99878 128 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 H2AFJQ9BTM1 129 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 C14orf105Q9NVL8 296 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 KLHL42Q9P2K6 505 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 ZNF282Q9UDV7 671 aaPredicted RBP9.76□□□□□ -0.85
HOXD3-203ENST00000432796 NFS1Q9Y697 457 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 RTTNQ86VV8 2226 aa9.76□□□□□ -0.85
HOXD3-203ENST00000432796 HYKKA2RU49 373 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 SMAPO00193 183 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 EIF3FO00303 357 aaPredicted RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 CES2O00748 559 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 SOCS6O14544 535 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 PRAMEF2O60811 474 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 ZWINTO95229 277 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 MPC1LP0DKB6 136 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 FBLP22087 321 aaKnown RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 HRH2P25021 359 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 GRIA3P42263 894 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 PAFAH1B1P43034 410 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 PNLIPRP1P54315 467 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 SKP1P63208 163 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 WASHC2DQ5SRD0 308 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 MICALCLQ6ZW33 695 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 OVCH1Q7RTY7 1134 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 SPPL2CQ8IUH8 684 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 FAM20CQ8IXL6 584 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 MYO1HQ8N1T3 1032 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 FLVCR1-AS1Q8TAF5 88 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 ACTRT1Q8TDG2 376 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 THAP3Q8WTV1 239 aaPredicted RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 MVB12AQ96EY5 273 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 OSBPL9Q96SU4 736 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 NRTNQ99748 197 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 DPH7Q9BTV6 452 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 CRB3Q9BUF7 120 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 ACAT2Q9BWD1 397 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 TRIM54Q9BYV2 358 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 PCBD2Q9H0N5 130 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 ZNF304Q9HCX3 659 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 PPANQ9NQ55 473 aaKnown RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 CCDC177Q9NQR7 707 aaPredicted RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 NPDC1Q9NQX5 325 aaPredicted RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 FBXO6Q9NRD1 293 aaPredicted RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 TAS2R13Q9NYV9 303 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 COQ3Q9NZJ6 369 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 ZC3H7BQ9UGR2 993 aaKnown RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 TAC3Q9UHF0 121 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 RUVBL2Q9Y230 463 aaKnown RBP9.75□□□□□ -0.85
HOXD3-203ENST00000432796 KLHL20Q9Y2M5 609 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 HS3ST3B1Q9Y662 390 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 PCM1Q15154 2024 aa9.75□□□□□ -0.85
HOXD3-203ENST00000432796 MXRA5Q9NR99 2828 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 TCRBV7S3A2A0A539 114 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 ARHGEF33A8MVX0 844 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 MYO1CO00159 1063 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 AVILO75366 819 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 PSIP1O75475 530 aaKnown RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 WISP2O76076 250 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 MATN4O95460 622 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 C8GP07360 202 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 MYBL2P10244 700 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 ACPPP15309 386 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 EZRP15311 586 aaKnown RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 CCND1P24385 295 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 DNASE1P24855 282 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 PSMB5P28074 263 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SKIV2L2P42285 1042 aaKnown RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SLC1A2P43004 574 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 AVPR1BP47901 424 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 GABRA4P48169 554 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SP140Q13342 867 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 CYP1B1Q16678 543 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 ACSBG2Q5FVE4 666 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SPANXN3Q5MJ09 141 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 GARNL3Q5VVW2 1013 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 ICE2Q659A1 982 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 KIRREL2Q6UWL6 708 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SYDE1Q6ZW31 735 aaPredicted RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 UBE2R2Q712K3 238 aaPredicted RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 RNF44Q7L0R7 432 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 REXO1L1PQ8IX06 675 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 PDIK1LQ8N165 341 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 SLC35F6Q8N357 371 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 METTL27Q8N6F8 245 aaPredicted RBP9.74□□□□□ -0.85
HOXD3-203ENST00000432796 CSNK1A1LQ8N752 337 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 WFDC11Q8NEX6 87 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 HAS2Q92819 552 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 MS4A14Q96JA4 679 aa9.74□□□□□ -0.85
HOXD3-203ENST00000432796 BIRC8Q96P09 236 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms