RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 OLIG2Q13516 323 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 POU6F1Q14863 301 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 PCOLCEQ15113 449 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 CEBPEQ15744 281 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 EXT1Q16394 746 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 ACER2Q5QJU3 275 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 RNF187Q5TA31 235 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 ATG9BQ674R7 924 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 DARS2Q6PI48 645 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 FIGNL1Q6PIW4 674 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 Q6ZPB1 254 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 APTXQ7Z2E3 356 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 PAQR7Q86WK9 346 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 TMEM151BQ8IW70 566 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 BEST3Q8N1M1 668 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 OTUD6BQ8N6M0 293 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 CSNK1A1LQ8N752 337 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 SLC35G2Q8TBE7 412 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 STYXQ8WUJ0 223 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 RND1Q92730 232 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 NINJ1Q92982 152 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 RAD51AP1Q96B01 352 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 LRRC46Q96FV0 321 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 IL17FQ96PD4 163 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 DRC3Q9H069 523 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 ENKD1Q9H0I2 346 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 ZNF700Q9H0M5 742 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 ANKRD10Q9NXR5 420 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 GNPTGQ9UJJ9 305 aa7.43□□□□□ -1.22
ECHDC1-207ENST00000430841 NCOA6Q14686 2063 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 AGAP14A8MT82 685 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 FFAR3O14843 346 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 KPNA5O15131 536 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 GPR42O15529 346 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 SLCO2B1O94956 709 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 ZRANB2O95218 330 aaKnown RBP eCLIP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 CELA2AP08217 269 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 ACADLP28330 430 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 RBL1P28749 1068 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 ADSLP30566 484 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PTGS2P35354 604 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 SOX18P35713 384 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 CDKN2BP42772 138 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 CDKN1CP49918 316 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 AGTR2P50052 363 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PRAMEP78395 509 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 TUBA3CQ13748 450 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 FASTKD1Q53R41 847 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 THEMIS2Q5TEJ8 643 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 GARNL3Q5VVW2 1013 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 FCRLBQ6BAA4 426 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PTRHD1Q6GMV3 140 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 TUBA3EQ6PEY2 450 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PAOXQ6QHF9 649 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 AFTPHQ6ULP2 937 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PACS1Q6VY07 963 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 NAPRTQ6XQN6 538 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 GALNTL5Q7Z4T8 443 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 SLC22A15Q8IZD6 547 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 OR5M3Q8NGP4 307 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 OR10Q1Q8NGQ4 319 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 OR6P1Q8NGX9 317 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 FLVCR1-AS1Q8TAF5 88 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 ADAMTS18Q8TE60 1221 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PSMF1Q92530 271 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PANX3Q96QZ0 392 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 FOXC2Q99958 501 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 BPIFA3Q9BQP9 254 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 PACSIN1Q9BY11 444 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 POLDIP3Q9BY77 421 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 TP63Q9H3D4 680 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 LRRC40Q9H9A6 602 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 MRPS30Q9NP92 439 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 SPTLC3Q9NUV7 552 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 NLE1Q9NVX2 485 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 TTC7AQ9ULT0 858 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 CAPN11Q9UMQ6 739 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 ALG6Q9Y672 507 aa7.42□□□□□ -1.22
ECHDC1-207ENST00000430841 ABCA4P78363 2273 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 FLNAP21333 2647 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 TRBV5-4A0A0C4DH59 114 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 FAM237BA0A1B0GVD1 139 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 SLC5A10A0PJK1 596 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 GOLGA6L9A6NEM1 432 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 GABRR3A8MPY1 467 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 H7C0S8 307 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 APOC4-APOC2K7ER74 178 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 FCHO1O14526 889 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 NDC80O14777 642 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 PFDN6O15212 129 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 SLC25A12O75746 678 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 APOC2P02655 101 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 TUBB4AP04350 444 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 CYC1P08574 325 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 CDC25BP30305 580 aa7.41□□□□□ -1.22
ECHDC1-207ENST00000430841 IST1P53990 364 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms