RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 EBLN1P0CF75 366 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 NDUFV2P19404 249 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PGDP52209 483 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 RAD23AP54725 363 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PTCD3Q96EY7 689 aaKnown RBP12.51□□□□□ -0.41
PTCH1-207ENST00000429896 PDCD10Q9BUL8 212 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 ARNT2Q9HBZ2 717 aa12.51□□□□□ -0.41
PTCH1-207ENST00000429896 H7BY64 318 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PDPK1O15530 556 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 SLC28A2O43868 658 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 DLX3O60479 287 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PSIP1O75475 530 aaKnown RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 NELFEP18615 380 aaKnown RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 MMP12P39900 470 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 FCHO2Q0JRZ9 810 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 TIGD2Q4W5G0 525 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 FAM92BQ6ZTR7 304 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PRAP1Q96NZ9 151 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PSMD9O00233 223 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 IL17FQ96PD4 163 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 RPP25Q9BUL9 199 aaKnown RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 BDH2Q9BUT1 245 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 EPB41L1Q9H4G0 881 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 C19orf25Q9UFG5 118 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PCDHGA3Q9Y5H0 932 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 KIAA1217Q5T5P2 1943 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 ZCWPW2A0A1B0GU75 182 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 MANBAO00462 879 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 MATN4O95460 622 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 ITPKBP27987 946 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 VPS26BQ4G0F5 336 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 EID2Q8N6I1 236 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 VANGL1Q8TAA9 524 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 LPGAT1Q92604 370 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 UGT2B28Q9BY64 529 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 GALPQ9UBC7 116 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF222Q9UK12 451 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 RARRES3Q9UL19 164 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 TLR4O00206 839 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 EIF3FO00303 357 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PDE9AO76083 593 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 LDOC1O95751 146 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 ALYREFQ86V81 257 aaKnown RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 OR4F6Q8NGB9 312 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 SMIM14Q96QK8 99 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PARP14Q460N5 1801 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 AQP9O43315 295 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 JAK1P23458 1154 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 FOXN2P32314 431 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 PDZD3Q86UT5 571 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 OR6C4Q8NGE1 309 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 RORBQ92753 470 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 BHLHE41Q9C0J9 482 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-207ENST00000429896 STOML2Q9UJZ1 356 aa12.5□□□□□ -0.41
PTCH1-207ENST00000429896 OLFM2O95897 454 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 CTBSQ01459 385 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SLC34A1Q06495 639 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ASPGQ86U10 573 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 HIPK1Q86Z02 1210 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ACVR1CQ8NER5 493 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SLC6A18Q96N87 628 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 DGAT2Q96PD7 388 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 APOL4Q9BPW4 351 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 PHF11Q9UIL8 331 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 MCIDASD6RGH6 385 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 PRMT3O60678 531 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 TRIM3O75382 744 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 RAB28P51157 221 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ADPRHP54922 357 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 HSPB3Q12988 150 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF761Q86XN6 746 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SLC9A6Q92581 669 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 VPS35Q96QK1 796 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF607Q96SK3 696 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 GAREM1Q9H706 876 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 REEP1Q9H902 201 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 MARCH7Q9H992 704 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 MCUBQ9NWR8 336 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 CLCA3PQ9Y6N3 262 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 ZNF236Q9UL36 1845 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 BHMG1C9JSJ3 638 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SERPINB7O75635 380 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 FCGR1AP12314 374 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 GRIA3P42263 894 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 MAGEA6P43360 314 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 TBPL1P62380 186 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 RPP38P78345 283 aaKnown RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 SPIBQ01892 262 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 PYDC2Q56P42 97 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 EIF3MQ7L2H7 374 aaKnown RBP12.49□□□□□ -0.41
PTCH1-207ENST00000429896 CAMK1GQ96NX5 476 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
PTCH1-207ENST00000429896 EPOPA6NHQ4 379 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms