RNA–Protein interactions for RNA: ENST00000428394.6

HCLS1-202, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2 BASIC

Gene HCLS1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-202ENST00000428394 SPASTQ9UBP0 616 aa16.3■□□□□ 0.2
HCLS1-202ENST00000428394 VPS4AQ9UN37 437 aa16.3■□□□□ 0.2
HCLS1-202ENST00000428394 TESMINQ9Y4I5 508 aa16.3■□□□□ 0.2
HCLS1-202ENST00000428394 PCDHGA6Q9Y5G7 932 aa16.3■□□□□ 0.2
HCLS1-202ENST00000428394 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
HCLS1-202ENST00000428394 LOC110117498-PIK3R3F6TDL0 507 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 PCDHGA12O60330 932 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 ABLIM3O94929 683 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 MED26O95402 600 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 IFNA14P01570 189 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 SELPP16109 830 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 SNRPD1P62314 119 aaKnown RBP16.29■□□□□ 0.2
HCLS1-202ENST00000428394 KCNJ10P78508 379 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 FCHO2Q0JRZ9 810 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 E2F2Q14209 437 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 TAF12Q16514 161 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 PTCHD3Q3KNS1 767 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 SPIN4Q56A73 249 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 DEPDC1Q5TB30 811 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 LAIR1Q6GTX8 287 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 GRHL2Q6ISB3 625 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 AHSA2Q719I0 299 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 CCDC80Q76M96 950 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 SLC22A16Q86VW1 577 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 NLRP8Q86W28 1048 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 ANKRD46Q86W74 232 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 LYSMD2Q8IV50 215 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 OR2AP1Q8NGE2 309 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 ZNF461Q8TAF7 563 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 WDR20Q8TBZ3 569 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 PIK3R3Q92569 461 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 TIFAQ96CG3 184 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 COQ8BQ96D53 544 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 DUSP26Q9BV47 211 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 CPEB1Q9BZB8 566 aaKnown RBP16.29■□□□□ 0.2
HCLS1-202ENST00000428394 GKN1Q9NS71 199 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 EXD2Q9NVH0 621 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 EVLQ9UI08 416 aaPredicted RBP16.29■□□□□ 0.2
HCLS1-202ENST00000428394 LSM7Q9UK45 103 aaKnown RBP16.29■□□□□ 0.2
HCLS1-202ENST00000428394 ERVK-11Q9UQG0 969 aa16.29■□□□□ 0.2
HCLS1-202ENST00000428394 C1orf226A1L170 272 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CARNS1A5YM72 827 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 EFCAB10A6NFE3 127 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 hCG_2039718K7EN88 272 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 RNASET2O00584 256 aaKnown RBP16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CYP4B1P13584 511 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 NR4A1P22736 598 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 S100A1P23297 94 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CTGFP29279 349 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CCR7P32248 378 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 HOXD12P35452 270 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 LIMK1P53667 647 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 SMAD3P84022 425 aaKnown RBP16.28■□□□□ 0.2
HCLS1-202ENST00000428394 SP3Q02447 781 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CREMQ03060 361 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 ACSM2AQ08AH3 577 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 SLC14A1Q13336 389 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 DGCR6Q14129 220 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 IRF3Q14653 427 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 TIGD6Q17RP2 521 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 INAVAQ3KP66 663 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 ACSM2BQ68CK6 577 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 ZNF621Q6ZSS3 439 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 ZBTB46Q86UZ6 589 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CCDC71Q8IV32 467 aaPredicted RBP16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CLP1Q92989 425 aaKnown RBP16.28■□□□□ 0.2
HCLS1-202ENST00000428394 REPS1Q96D71 796 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 BARD1Q99728 777 aaKnown RBP16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CTRCQ99895 268 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 HEPHQ9BQS7 1158 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CCDC32Q9BV29 185 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 BHLHE41Q9C0J9 482 aaPredicted RBP16.28■□□□□ 0.2
HCLS1-202ENST00000428394 ZNF229Q9UJW7 825 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 CFL2Q9Y281 166 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 PCDHGA3Q9Y5H0 932 aa16.28■□□□□ 0.2
HCLS1-202ENST00000428394 TOR1BO14657 336 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 TNRC18O15417 2968 aaPredicted RBP16.27■□□□□ 0.2
HCLS1-202ENST00000428394 RFPL2O75678 378 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 GSTM1P09488 218 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 FLT3LGP49771 235 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 DCDC1P59894 354 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 SELENOWP63302 87 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 IL1RL1Q01638 556 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 IRF8Q02556 426 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 PPP1R8Q12972 351 aaKnown RBP16.27■□□□□ 0.2
HCLS1-202ENST00000428394 CHIT1Q13231 466 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 CPTPQ5TA50 214 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 TMEM236Q5W0B7 351 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 CRTC1Q6UUV9 634 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 NPAS3Q8IXF0 933 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 GPR26Q8NDV2 337 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 PROX1Q92786 737 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 MAPKAP1Q9BPZ7 522 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 CDCA4Q9BXL8 241 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 TSR3Q9UJK0 312 aaKnown RBP16.27■□□□□ 0.2
HCLS1-202ENST00000428394 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 YIPF1Q9Y548 306 aa16.27■□□□□ 0.2
HCLS1-202ENST00000428394 LYVE1Q9Y5Y7 322 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms