RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TAZQ16635 292 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TXNDC11Q6PKC3 985 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 DCUN1D3Q8IWE4 304 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 LIX1Q8N485 282 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 GAB3Q8WWW8 586 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SCRN2Q96FV2 425 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SLC6A18Q96N87 628 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 HOPXQ9BPY8 73 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 LDAHQ9H6V9 325 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 FAIMQ9NVQ4 179 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SUCOQ9UBS9 1254 aaKnown RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TMED5Q9Y3A6 229 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 CACNG3O60359 315 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SLC22A3O75751 556 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TRAPPC6AO75865 159 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 MTHFD1P11586 935 aaKnown RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF182P17025 639 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SHMT2P34897 504 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 SUOXP51687 545 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 DUOXA1Q1HG43 343 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 DEFB110Q30KQ9 67 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 C3orf38Q5JPI3 329 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ADGRG6Q86SQ4 1221 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TMEM135Q86UB9 458 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 ZC3H7AQ8IWR0 971 aaKnown RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 NPWQ8N729 165 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 OR5M3Q8NGP4 307 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 THAP3Q8WTV1 239 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 XAGE5Q8WWM1 108 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 IL17FQ96PD4 163 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 CITED4Q96RK1 184 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 TM7SF3Q9NS93 570 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 MRTO4Q9UKD2 239 aaKnown RBP10.32□□□□□ -0.76
TCOF1-204ENST00000427724 PCDHGA4Q9Y5G9 962 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 U3KQV3 271 aa10.32□□□□□ -0.76
TCOF1-204ENST00000427724 OR52A4PA6NMU1 304 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 H7BY64 318 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 GFRA2O00451 464 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 BCAS2O75934 225 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 HEXBP07686 556 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CLCQ05315 142 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 LIPEQ05469 1076 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 SLBPQ14493 270 aaKnown RBP eCLIP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF829Q3KNS6 432 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 C1orf210Q8IVY1 113 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CPSF7Q8N684 471 aaKnown RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 PRAP1Q96NZ9 151 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 ADI1Q9BV57 179 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 KCNH6Q9H252 994 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 MAGEE1Q9HCI5 957 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CNOT6Q9ULM6 557 aaKnown RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 POLR3HQ9Y535 204 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CLDN25C9JDP6 229 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 COQ9O75208 318 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CLDN9O95484 217 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 EPOP01588 193 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 HSMCR30P0CW71 290 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 PRKAR1AP10644 381 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 DNAJB1P25685 340 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 NFE2L1Q14494 772 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 SGCBQ16585 318 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF534Q76KX8 674 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 KRT73Q86Y46 540 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 C8orf59Q8N0T1 100 aaPredicted RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 MARVELD2Q8N4S9 558 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 TRAM1L1Q8N609 369 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 PPP3R2Q96LZ3 170 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 PRRX2Q99811 253 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 TDRD1Q9BXT4 1180 aaKnown RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 RIBC2Q9H4K1 309 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 ZNF487B1APH4 448 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 OR4F21O95013 312 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 TFAP2AP05549 437 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 SLC35E2BP0CK96 405 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 SLC7A1P30825 629 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 HSD17B2P37059 387 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 SPINT3P49223 89 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 RELAQ04206 551 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 GK3PQ14409 553 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 NR0B2Q15466 257 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 ALG11Q2TAA5 492 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CYS1Q717R9 158 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CEP97Q8IW35 865 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 EID3Q8N140 333 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 NACC2Q96BF6 587 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 CNDP2Q96KP4 475 aaKnown RBP10.31□□□□□ -0.76
TCOF1-204ENST00000427724 UGT2B28Q9BY64 529 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 TRIM8Q9BZR9 551 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 OR8D2Q9GZM6 311 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 EBF1Q9UH73 591 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 SLC22A14Q9Y267 594 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 PCDHGA11Q9Y5H2 935 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 ST14Q9Y5Y6 855 aa10.31□□□□□ -0.76
TCOF1-204ENST00000427724 HTR3EA5X5Y0 456 aa10.3□□□□□ -0.76
TCOF1-204ENST00000427724 AQP9O43315 295 aa10.3□□□□□ -0.76
TCOF1-204ENST00000427724 FAM189A1O60320 539 aa10.3□□□□□ -0.76
TCOF1-204ENST00000427724 MAFKO60675 156 aa10.3□□□□□ -0.76
TCOF1-204ENST00000427724 ANXA4P09525 319 aaPredicted RBP10.3□□□□□ -0.76
TCOF1-204ENST00000427724 CCKBRP32239 447 aa10.3□□□□□ -0.76
TCOF1-204ENST00000427724 BTN3A2P78410 334 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms