RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 ATAD3BQ5T9A4 648 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 RSPO2Q6UXX9 243 aaPredicted RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 GDPGP1Q6ZNW5 385 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 USP45Q70EL2 814 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 C16orf59Q7L2K0 433 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ZNF605Q86T29 641 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 NLRP8Q86W28 1048 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 RASGRP3Q8IV61 690 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ZNF675Q8TD23 568 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 MAPKAP1Q9BPZ7 522 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 DUSP26Q9BV47 211 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 TSR3Q9UJK0 312 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 VPS4AQ9UN37 437 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 TRAPPC4Q9Y296 219 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 FCF1Q9Y324 198 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 GRIP1Q9Y3R0 1128 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 PCDHB7Q9Y5E2 793 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 C1orf226A1L170 272 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 H0YIV9 168 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 TNFRSF11BO00300 401 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 RNASET2O00584 256 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 TSPAN3O60637 253 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 AOC2O75106 756 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 AP2A2O94973 939 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 CLDN7O95471 211 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 PIPP12273 146 aaPredicted RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 HMGA1P17096 107 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 MZF1P28698 734 aaPredicted RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 HOXD11P31277 338 aaPredicted RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 TIE1P35590 1138 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 UGT2B15P54855 530 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 COPZ1P61923 177 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ACSM2AQ08AH3 577 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 FCHO2Q0JRZ9 810 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 CDH18Q13634 790 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 PTCHD3Q3KNS1 767 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 IFI44LQ53G44 452 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 SPIN4Q56A73 249 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 SPANXN2Q5MJ10 180 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 RTP2Q5QGT7 225 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ATXN7L2Q5T6C5 722 aaPredicted RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 STEAP3Q658P3 488 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ACSM2BQ68CK6 577 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 TPGS2Q68CL5 300 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 C19orf48Q6RUI8 117 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 VTCN1Q7Z7D3 282 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 KRT73Q86Y46 540 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 RASAL3Q86YV0 1011 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 GOT1L1Q8NHS2 421 aaPredicted RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 COQ8BQ96D53 544 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 MTFMTQ96DP5 389 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 CASD1Q96PB1 797 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 CDCA4Q9BXL8 241 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ALOXE3Q9BYJ1 711 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ZNF556Q9HAH1 456 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 C3orf14Q9HBI5 128 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ABCB10Q9NRK6 738 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 TRMT13Q9NUP7 481 aaKnown RBP9.56□□□□□ -0.88
TPTE-201ENST00000427445 SIRT5Q9NXA8 310 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 LYVE1Q9Y5Y7 322 aa9.56□□□□□ -0.88
TPTE-201ENST00000427445 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 GADD45AP24522 165 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 CCR7P32248 378 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 CSKP41240 450 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 IRF8Q02556 426 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 PPIGQ13427 754 aaKnown RBP eCLIP9.55□□□□□ -0.88
TPTE-201ENST00000427445 VEPH1Q14D04 833 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 RGNQ15493 299 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 CPTPQ5TA50 214 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 GRHL2Q6ISB3 625 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 PDE12Q6L8Q7 609 aaKnown RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 DSG4Q86SJ6 1040 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 TRIM69Q86WT6 500 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 IFNL1Q8IU54 200 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 NPAS3Q8IXF0 933 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 STX19Q8N4C7 294 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 C1orf52Q8N6N3 182 aaKnown RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 NAT16Q8N8M0 369 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 ST13P5Q8NFI4 369 aaPredicted RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 OR10G2Q8NGC3 310 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 OR4C15Q8NGM1 316 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 WDR20Q8TBZ3 569 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 GGHQ92820 318 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.88
TPTE-201ENST00000427445 RPL3LQ92901 407 aaKnown RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 CLP1Q92989 425 aaKnown RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 PYCR2Q96C36 320 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 TMCO6Q96DC7 493 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 C11orf24Q96F05 449 aaPredicted RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 SCRN2Q96FV2 425 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 MCCC1Q96RQ3 725 aaPredicted RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 CDADC1Q9BWV3 514 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 EMILIN2Q9BXX0 1053 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 BHLHE41Q9C0J9 482 aaPredicted RBP9.55□□□□□ -0.88
TPTE-201ENST00000427445 HOXD1Q9GZZ0 328 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 RASSF1Q9NS23 344 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 RAD18Q9NS91 495 aa9.55□□□□□ -0.88
TPTE-201ENST00000427445 FZD4Q9ULV1 537 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms