RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ANKRD66B4E2M5 251 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 KDELR3O43731 214 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 ENTPD6O75354 484 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 TRAPPC6AO75865 159 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 XRCC1P18887 633 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 ZNF280AP59817 542 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 RPS13P62277 151 aaKnown RBP17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 CDK6Q00534 326 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 TEAD2Q15562 447 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 KLHL6Q8WZ60 621 aa17.45■□□□□ 0.38
ARHGEF28-203ENST00000426542 KANTRA0A1W2PQU2 76 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 METTL21EPA6NDL7 271 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 DLX3O60479 287 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 GBAP04062 536 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 CSTBP04080 98 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 MATN1P21941 496 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 SCNN1AP37088 669 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 CMTM8Q8IZV2 173 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 Q9N2J8 555 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 PIGRP01833 764 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 TPTEP56180 551 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ZNF776Q68DI1 518 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 TMPRSS9Q7Z410 1059 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 INO80EQ8NBZ0 244 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 AIFM2Q9BRQ8 373 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ITPAQ9BY32 194 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 BTBD1Q9H0C5 482 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 SMOC2Q9H3U7 446 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 TMED5Q9Y3A6 229 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 GRXCR1A8MXD5 290 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 AKAP8O43823 692 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 SPIN3Q5JUX0 258 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 EOGTQ5NDL2 527 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 HSDL2Q6YN16 418 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ZC3HC1Q86WB0 502 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 TOMM5Q8N4H5 51 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 JAGN1Q8N5M9 183 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 BARD1Q99728 777 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 GNG8Q9UK08 70 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 CFL2Q9Y281 166 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 A0A1B0GVT2 93 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 E7EQ34 232 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 HCRTO43612 131 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 DECR1Q16698 335 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 TFGQ92734 400 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 PYURFQ96I23 114 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 SLC7A8Q9UHI5 535 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 LOC100130705A0A1B0GUX0 176 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ZNF30P17039 623 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 NUDT6P53370 316 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ARF3P61204 181 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ARF1P84077 181 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ODF4Q2M2E3 257 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 SPATC1Q76KD6 591 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 TMEM156Q8N614 296 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 C12orf42Q96LP6 360 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 ZNF641Q96N77 438 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 MINDY3Q9H8M7 445 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 RNF11Q9Y3C5 154 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 KCTD3Q9Y597 815 aa17.44■□□□□ 0.38
ARHGEF28-203ENST00000426542 CCND3P30281 292 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 GXYLT1Q4G148 440 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 METTL7AQ9H8H3 244 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 CDC40O60508 579 aaKnown RBP eCLIP17.43■□□□□ 0.384e-6■■□□□ 12.3
ARHGEF28-203ENST00000426542 PIM1P11309 404 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 BMP8BP34820 402 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 RAB8AP61006 207 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 BMP8AQ7Z5Y6 402 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 PHOSPHO1Q8TCT1 267 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 SLC5A11Q8WWX8 675 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 PCDHB11Q9Y5F2 797 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 TRIM64A6NGJ6 449 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 MUSKO15146 869 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 PMM2O15305 246 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 INPPL1O15357 1258 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 TYRP14679 529 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 CCNHP51946 323 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 PPP1R8Q12972 351 aaKnown RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 PLEKHA6Q9Y2H5 1048 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 SEMA3AQ14563 771 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 OR10Q1Q8NGQ4 319 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 TUBA8Q9NY65 449 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 FNIP2Q9P278 1114 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 DKK3Q9UBP4 350 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 AFDNP55196 1824 aaKnown RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 A0A1W2PQ45 241 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 A0A1W2PQY0 241 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 TSPAN4O14817 238 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 LDB2O43679 373 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 CYP17A1P05093 508 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 INAVAQ3KP66 663 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 CCDC120Q96HB5 630 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 ASPNQ9BXN1 380 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 TMEM165Q9HC07 324 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 TDP1Q9NUW8 608 aa17.43■□□□□ 0.38
ARHGEF28-203ENST00000426542 SLC25A11Q02978 314 aaKnown RBP17.42■□□□□ 0.38
ARHGEF28-203ENST00000426542 ST3GAL3Q11203 375 aa17.42■□□□□ 0.38
ARHGEF28-203ENST00000426542 MS4A13Q5J8X5 152 aa17.42■□□□□ 0.38
ARHGEF28-203ENST00000426542 GKN2Q86XP6 184 aa17.42■□□□□ 0.38
ARHGEF28-203ENST00000426542 FOXRED2Q8IWF2 684 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms