RNA–Protein interactions for RNA: ENST00000425021.1

LINC00494-202, long intergenic non-protein coding RNA 494, humanhuman

TSL 2

Gene LINC00494, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-202ENST00000425021 TMEM121Q9BTD3 319 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 RIOK2Q9BVS4 552 aaKnown RBP6.54□□□□□ -1.36
LINC00494-202ENST00000425021 REXO4Q9GZR2 422 aaKnown RBP6.54□□□□□ -1.36
LINC00494-202ENST00000425021 CLPBQ9H078 707 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 TP63Q9H3D4 680 aaPredicted RBP6.54□□□□□ -1.36
LINC00494-202ENST00000425021 NELFAQ9H3P2 528 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 PRDM8Q9NQV8 689 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 RASSF1Q9NS23 344 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 HOMER3Q9NSC5 361 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 TRNAU1APQ9NX07 287 aaKnown RBP6.54□□□□□ -1.36
LINC00494-202ENST00000425021 VPS18Q9P253 973 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 CD84Q9UIB8 345 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 R3HDM2Q9Y2K5 976 aaKnown RBP6.54□□□□□ -1.36
LINC00494-202ENST00000425021 NEUROG3Q9Y4Z2 214 aa6.54□□□□□ -1.36
LINC00494-202ENST00000425021 MAP1BP46821 2468 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 LY6G6EA0A0G2JKS1 128 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 DYTNA2CJ06 578 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ERI2A8K979 691 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 CES2O00748 559 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 YY2O15391 372 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 KIF5CO60282 957 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 METTL18O95568 372 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 AP2A1O95782 977 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 AGTP01019 485 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 VIPP01282 170 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 FGGP02679 453 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ANXA6P08133 673 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 PIRTP0C851 137 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 JUPP14923 745 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ACTN2P35609 894 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 FDFT1P37268 417 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SPAM1P38567 509 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 LOXL3P58215 753 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 E2F1Q01094 437 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 HHEXQ03014 270 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 CCDC173Q0VFZ6 552 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 DNAJC3Q13217 504 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 C1orf61Q13536 156 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 PEX6Q13608 980 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 EFR3AQ14156 821 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SIX1Q15475 284 aaPredicted RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SMAD1Q15797 465 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 CCNG2Q16589 344 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 DEFB133Q30KQ1 61 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ZNF569Q5MCW4 686 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 KCTD16Q68DU8 428 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 C4orf22Q6V702 233 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 RD3Q7Z3Z2 195 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 RASGEF1CQ8N431 466 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 TTC30BQ8N4P2 665 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SLC25A41Q8N5S1 370 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 TRAM1L1Q8N609 369 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ARL10Q8N8L6 244 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 GPR26Q8NDV2 337 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 OR6C4Q8NGE1 309 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 CPT1CQ8TCG5 803 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 BRSK1Q8TDC3 778 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 BLOC1S5Q8TDH9 187 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ATG4AQ8WYN0 398 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 HDAC2Q92769 488 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 NAT6Q93015 286 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 MARS2Q96GW9 593 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 PBKQ96KB5 322 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 COG8Q96MW5 612 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 TRAPPC9Q96Q05 1148 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 VPS35Q96QK1 796 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 NAP1L3Q99457 506 aaPredicted RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 AGAP2Q99490 1192 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 TBL1YQ9BQ87 522 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 FICDQ9BVA6 458 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SCNM1Q9BWG6 230 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SPATA16Q9BXB7 569 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 GSDMCQ9BYG8 508 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 LRRC40Q9H9A6 602 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 RMI1Q9H9A7 625 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 MRPL40Q9NQ50 206 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 IL17CQ9P0M4 197 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 TTC7AQ9ULT0 858 aaPredicted RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 SUFUQ9UMX1 484 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ZNF148Q9UQR1 794 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 DRG1Q9Y295 367 aaKnown RBP6.53□□□□□ -1.36
LINC00494-202ENST00000425021 PKP3Q9Y446 797 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 U3KQA8 63 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 CFAP47Q6ZTR5 3102 aa6.53□□□□□ -1.36
LINC00494-202ENST00000425021 ACACAQ13085 2346 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 EME2A4GXA9 379 aaPredicted RBP6.52□□□□□ -1.37
LINC00494-202ENST00000425021 C2orf81A6NN90 581 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 PRSS47A8MTI9 375 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 CEP104O60308 925 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 IPO13O94829 963 aaKnown RBP6.52□□□□□ -1.37
LINC00494-202ENST00000425021 SUN1O94901 812 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 SLC5A2P31639 672 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 CXCR5P32302 372 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 HADHAP40939 763 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 GNPDA1P46926 289 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 ZNF134P52741 427 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 PRKAG1P54619 331 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 ABHD18Q0P651 414 aa6.52□□□□□ -1.37
LINC00494-202ENST00000425021 ILF3Q12906 894 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC00494-202ENST00000425021 KLF10Q13118 480 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms