RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FNTAP49354 379 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 RGS4P49798 205 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ARHGDIBP52566 201 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SELENOVP59797 346 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 RPS15P62841 145 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SIM1P81133 766 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CCZ1BP86790 482 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CCZ1P86791 482 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CACNG1Q06432 222 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DMPKQ09013 629 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SREBF2Q12772 1141 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF169Q14929 603 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 NR1D2Q14995 579 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ACKR1Q16570 336 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF829Q3KNS6 432 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CD300EQ496F6 205 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 LBHQ53QV2 105 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 HSP90AA4PQ58FG1 418 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 AKNAD1Q5T1N1 836 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 AGBL2Q5U5Z8 902 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PTRHD1Q6GMV3 140 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 LCTLQ6UWM7 567 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 KDM7AQ6ZMT4 941 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 TPGS1Q6ZTW0 290 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 KCTD8Q6ZWB6 473 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ANO5Q75V66 913 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 RNF144BQ7Z419 303 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 NRARPQ7Z6K4 114 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 KIAA1328Q86T90 577 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 LINC00523Q86TU6 105 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 FAM131BQ86XD5 332 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 C1orf87Q8N0U7 546 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 GCNT2Q8N0V5 402 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 LRRC75A-AS1Q8N1F1 130 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZCCHC9Q8N567 271 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZBTB2Q8N680 514 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF611Q8N823 705 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 FAM98AQ8NCA5 519 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 OR6S1Q8NH40 331 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 OR14L1PQ8NHC6 308 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ANGPTL6Q8NI99 470 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 FAM81AQ8TBF8 368 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 MAIP1Q8WWC4 291 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 MOB3AQ96BX8 217 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 RSPRY1Q96DX4 576 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PRRC1Q96M27 445 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SPATA33Q96N06 139 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 TEFMQ96QE5 360 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 TAAR6Q96RI8 345 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 MYADMQ96S97 322 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PNKPQ96T60 521 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 NPY6RQ99463 290 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 FEVQ99581 238 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CPNE1Q99829 537 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF559Q9BR84 538 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ALKBH7Q9BT30 221 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 MSTO1Q9BUK6 570 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SF3B5Q9BWJ5 86 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 NUSAP1Q9BXS6 441 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PPIL3Q9H2H8 161 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SLC28A3Q9HAS3 691 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PDGFCQ9NRA1 345 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 YAE1D1Q9NRH1 226 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DDX28Q9NUL7 540 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM248Q9NWD8 314 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DPP3Q9NY33 737 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DONSONQ9NYP3 566 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SEC14L3Q9UDX4 400 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 IL20RAQ9UHF4 553 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ATPIF1Q9UII2 106 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SERTAD3Q9UJW9 196 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ABCC4O15439 1325 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 KANSL1LA0AUZ9 987 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CPED1A4D0V7 1026 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ANKRD61A6NGH8 418 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TUBAL3A6NHL2 446 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GABRR3A8MPY1 467 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MCIDASD6RGH6 385 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 H0YHG0 523 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GOLGA8TH3BQL2 631 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MGST3O14880 152 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 AP5Z1O43299 807 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FCMRO60667 390 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SDC3O75056 442 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SORBS2O94875 1100 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MT-ND1P03886 318 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ICAM1P05362 532 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ALPIP09923 528 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ALDOCP09972 364 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MYZAPP0CAP1 466 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PNMTP11086 282 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FCGR2AP12318 317 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MX1P20591 662 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 EDN2P20800 178 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PAICSP22234 425 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 AZGP1P25311 298 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 YWHAQP27348 245 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 DPP4P27487 766 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PIK3R1P27986 724 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms