RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SLC1A5Q15758 541 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 FAM166AQ6J272 317 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 GDPGP1Q6ZNW5 385 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 CHST3Q7LGC8 479 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 PIGWQ7Z7B1 504 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 GPC2Q8N158 579 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 CCAR2Q8N163 923 aaKnown RBP3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 FAM89BQ8N5H3 189 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 OCC1Q8TAD7 63 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 NSMAFQ92636 917 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 P2RX5Q93086 422 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 ERP27Q96DN0 273 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 ATXN7L3BQ96GX2 97 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 RBM41Q96IZ5 413 aaKnown RBP3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 GTPBP2Q9BX10 602 aaKnown RBP3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 HOXD1Q9GZZ0 328 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 SDCBP2Q9H190 292 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 RIMS4Q9H426 269 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 RAB9BQ9NP90 201 aa3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 ELF5Q9UKW6 265 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P49-201ENST00000418882 H3BMM5 538 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 CCDC188H7C350 402 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 CCDC175P0C221 793 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 STAG3L1P0CL83 205 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 EEF1DP29692 281 aaKnown RBP3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 PDHA2P29803 388 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 HSD17B3P37058 310 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 CRKLP46109 303 aaKnown RBP3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 NPY4RP50391 375 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 TMEM50BP56557 158 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 COX10Q12887 443 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 ELAVL2Q12926 359 aaKnown RBP3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 ENPP7Q6UWV6 458 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 ABI3BPQ7Z7G0 1075 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 KIF18AQ8NI77 898 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 SEPT1Q8WYJ6 367 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 CNDP2Q96KP4 475 aaKnown RBP3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 RMDN2Q96LZ7 410 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 AGAP4Q96P64 663 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 BTBD9Q96Q07 612 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 TBC1D13Q9NVG8 400 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 NDE1Q9NXR1 346 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 PILRBQ9UKJ0 227 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 WIPI2Q9Y4P8 454 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 COL2A1P02458 1487 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 NEDD4P46934 1319 aa3.65□□□□□ -1.83
HMGB1P49-201ENST00000418882 FAM86B1E9PN63 330 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 F8VVB4 439 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 F8VWA3 439 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 SAP30O75446 220 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 FAM86B2P0C5J1 330 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 PRKAR1AP10644 381 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 LBPP18428 481 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF10P21506 573 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 PTAFRP25105 342 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 RGS7P49802 495 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 ZNF41P51814 821 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 KRTAP10-3P60369 221 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 PTENP60484 403 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 CACNG1Q06432 222 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 PAX8Q06710 450 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 C6orf136Q5SQH8 315 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 MOXD1Q6UVY6 613 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 BTNL8Q6UX41 500 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 NRARPQ7Z6K4 114 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 GBP7Q8N8V2 638 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 RADILQ96JH8 1075 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 GDAP1L1Q96MZ0 367 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 GPATCH1Q9BRR8 931 aaKnown RBP3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 HACD3Q9P035 362 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 GIMAP2Q9UG22 337 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 MUTYHQ9UIF7 546 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 MOB4Q9Y3A3 225 aa3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 COL5A2P05997 1499 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P49-201ENST00000418882 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 SRRM5B3KS81 715 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 K7EQD1 137 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 ACADSP16219 412 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 PSMB4P28070 264 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 MFAP3P55082 362 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 SGCGQ13326 291 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 DUSP5Q16690 384 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 ERN2Q76MJ5 926 aaKnown RBP3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 CCDC186Q7Z3E2 898 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 CCDC60Q8IWA6 550 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 LMNTD2Q8IXW0 634 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 TCEANCQ8N8B7 351 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 OR4C15Q8NGM1 316 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 C9orf43Q8TAL5 461 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 ST6GALNAC6Q969X2 333 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 NXPE2Q96DL1 559 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 PGM2Q96G03 612 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 SOSTQ9BQB4 213 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 DCTN5Q9BTE1 182 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 SNX25Q9H3E2 840 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 B3GAT2Q9NPZ5 323 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 PKD2L2Q9NZM6 624 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 CSAG2Q9Y5P2 127 aa3.63□□□□□ -1.83
HMGB1P49-201ENST00000418882 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms