RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ANKMY1Q9P2S6 941 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 VPS29Q9UBQ0 182 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ADGRE2Q9UHX3 823 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 EIF3LQ9Y262 564 aaKnown RBP6.38□□□□□ -1.39
VPS41-204ENST00000413141 DLGAP4Q9Y2H0 992 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 ENTPD2Q9Y5L3 495 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
VPS41-204ENST00000413141 A0A0J9YY10 115 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 LOC100653049A0A140TA62 436 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 OR2A25A4D2G3 310 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 ANKDD1BA6NHY2 528 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 BBIP1A8MTZ0 92 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PATE3B3GLJ2 98 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 C9JVG2 144 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 NR5A2O00482 541 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 YKT6O15498 198 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 ZW10O43264 779 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 TNFSF14O43557 240 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 OR1F1O43749 312 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SH3BGRLO75368 114 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SLC22A3O75751 556 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 KRT34O76011 436 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 UBXN7O94888 489 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SEMA3DO95025 777 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 EPN2O95208 641 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 FKBP9O95302 570 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 TBX6O95947 436 aaPredicted RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 THRAP10827 490 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PRPS2P11908 318 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 BCKDHAP12694 445 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 EZRP15311 586 aaKnown RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 SDC1P18827 310 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CAPN3P20807 821 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 MAGP20916 626 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 GSTM2P28161 218 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PTPN4P29074 926 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 TIA1P31483 386 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS41-204ENST00000413141 GRK3P35626 688 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 ZFP36L2P47974 494 aaKnown RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 LSSP48449 732 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RASSF2P50749 326 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CCT8P50990 548 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 MNAT1P51948 309 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 EPHA4P54764 986 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 UFM1P61960 85 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PPP1CAP62136 330 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 ACTN3Q08043 901 aaPredicted RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 ACSM2AQ08AH3 577 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 BIRC2Q13490 618 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CUL3Q13618 768 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CYLC2Q14093 348 aaPredicted RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 RCAN2Q14206 197 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PTGR1Q14914 329 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RPS6KA2Q15349 733 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 LPAL2Q16609 132 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 HLA-BQ31612 363 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CACHD1Q5VU97 1274 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 ACSM2BQ68CK6 577 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 REP15Q6BDI9 236 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 BLOC1S3Q6QNY0 202 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RINLQ6ZS11 566 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 COMMD6Q7Z4G1 85 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PLD3Q8IV08 490 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 FUNDC1Q8IVP5 155 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SLC35F3Q8IY50 421 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 KIF2BQ8N4N8 673 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 TBC1D19Q8N5T2 526 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 C1orf52Q8N6N3 182 aaKnown RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 RBM15BQ8NDT2 890 aaKnown RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 TTLQ8NG68 377 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 FBXO27Q8NI29 283 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PROKR1Q8TCW9 393 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 CREB3L4Q8TEY5 395 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 KLHL29Q96CT2 875 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RCN3Q96D15 328 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 TEX37Q96LM6 180 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 APOLD1Q96LR9 279 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SERPINI1Q99574 410 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SLC38A3Q99624 504 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RTKNQ9BST9 563 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SLC25A23Q9BV35 468 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 EBPLQ9BY08 206 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 MS4A8Q9BY19 250 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 SYNPO2LQ9H987 977 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 IL21RQ9HBE5 538 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 PRM3Q9NNZ6 103 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS41-204ENST00000413141 TMEM45AQ9NWC5 275 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 NMRK1Q9NWW6 199 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 HRASLS2Q9NWW9 162 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SIRT5Q9NXA8 310 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 NLGN3Q9NZ94 848 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 POMT2Q9UKY4 750 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 SNX7Q9UNH6 387 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RUVBL1Q9Y265 456 aaKnown RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 KLHL20Q9Y2M5 609 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RRP15Q9Y3B9 282 aaKnown RBP6.37□□□□□ -1.39
VPS41-204ENST00000413141 KLK4Q9Y5K2 254 aa6.37□□□□□ -1.39
VPS41-204ENST00000413141 RNF215Q9Y6U7 377 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms