RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ANKRD10Q9NXR5 420 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 ZNF835Q9Y2P0 537 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 PCDHGB6Q9Y5F9 930 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 CAPN6Q9Y6Q1 641 aa13.46□□□□□ -0.25
HLA-DQB2-229ENST00000411527 GTF3C1Q12789 2109 aa13.46□□□□□ -0.26
HLA-DQB2-229ENST00000411527 C2CD3Q4AC94 2353 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NPIPA5E9PKD4 350 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 H0YIG0 161 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NSA2O95478 260 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SYF2O95926 243 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 EEF1DP29692 281 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SSTR2P30874 369 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CD96P40200 585 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 XCR1P46094 333 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ADARP55265 1226 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 OR1C1Q15619 314 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MEP1AQ16819 746 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SPINK14Q6IE38 97 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PRSS41Q7RTY9 318 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ANKRD37Q7Z713 158 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CRLF3Q8IUI8 442 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TXLNBQ8N3L3 684 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MDS2Q8NDY4 140 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 BAG1Q99933 345 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 UTP23Q9BRU9 249 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 DESI2Q9BSY9 194 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GPAMQ9HCL2 828 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 HCN3Q9P1Z3 774 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NPIPA1Q9UND3 350 aa13.45□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CYC1P08574 325 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CD46P15529 392 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KIR3DL1P43629 444 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 AGTR2P50052 363 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PTK6Q13882 451 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 C4orf22Q6V702 233 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 Q6ZPB1 254 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CENPUQ71F23 418 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 VN1R4Q7Z5H5 301 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 LRRC56Q8IYG6 542 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 FBXO15Q8NCQ5 510 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 M1APQ8TC57 530 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SCMH1Q96GD3 660 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SLC30A3Q99726 388 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NPAS2Q99743 824 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TMEM184CQ9NVA4 438 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MEMO1Q9Y316 297 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ADGRG4Q8IZF6 3080 aa13.44□□□□□ -0.26
HLA-DQB2-229ENST00000411527 DCHS2Q6V1P9 2916 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MED13LQ71F56 2210 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SGK494L7N484 410 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ZNHIT1O43257 154 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ASNA1O43681 348 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ZBTB14O43829 449 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MAN1A2O60476 641 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ABOP16442 354 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 IL1RNP18510 177 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 OGNP20774 298 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 BCL6P41182 706 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CLCN7P51798 805 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 RPS15AP62244 130 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 OC90Q02509 493 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ACTN3Q08043 901 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CUL1Q13616 776 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 EXT1Q16394 746 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CCNG2Q16589 344 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TTLL9Q3SXZ7 439 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KIAA0930Q6ICG6 404 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NEPROQ6NW34 567 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 NCCRP1Q6ZVX7 275 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GSTA5Q7RTV2 222 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SPNS2Q8IVW8 549 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CEP97Q8IW35 865 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PRELID2Q8N945 189 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TMEM178AQ8NBL3 297 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MMP25Q9NPA2 562 aa13.43□□□□□ -0.26
HLA-DQB2-229ENST00000411527 KCNE1BA0A087WTH5 132 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 ASPDHA6ND91 283 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GABRR3A8MPY1 467 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GFYI3L273 518 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SP1P08047 785 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 F7P08709 466 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MPC1LP0DKB6 136 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CAPN3P20807 821 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 HRH2P25021 359 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 IMPA1P29218 277 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SIX1Q15475 284 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 SFT2D3Q587I9 215 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 MEI1Q5TIA1 1274 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PAPD4Q6PIY7 484 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 GALNTL5Q7Z4T8 443 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 CILP2Q8IUL8 1156 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 TMEM139Q8IV31 216 aa13.42□□□□□ -0.26
HLA-DQB2-229ENST00000411527 RNF10Q8N5U6 811 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms