RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 USP53Q70EK8 1073 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 SYVN1Q86TM6 617 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 CLYBLQ8N0X4 340 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 DNAJC22Q8N4W6 341 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 MFSD9Q8NBP5 474 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 CAMKVQ8NCB2 501 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 OR7G3Q8NG95 312 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 WDR20Q8TBZ3 569 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PIWIL2Q8TC59 973 aaKnown RBP12.48□□□□□ -0.41
LIMS2-203ENST00000409254 USP7Q93009 1102 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PRAP1Q96NZ9 151 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 SORT1Q99523 831 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 NRTNQ99748 197 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 CMKLR1Q99788 373 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 NLNQ9BYT8 704 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 SOHLH2Q9NX45 425 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 ZNF225Q9UK10 706 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 PLCL2Q9UPR0 1127 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 NUP210LQ5VU65 1888 aa12.48□□□□□ -0.41
LIMS2-203ENST00000409254 WDR91A4D1P6 747 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 FITM1A5D6W6 292 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 URADA6NGE7 173 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ANKDD1BA6NHY2 528 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 SLC9B1P1A6NJY1 282 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 UBFD1O14562 309 aaKnown RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 HAT1O14929 419 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 SEMA3DO95025 777 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 KCNK5O95279 499 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 CHRNGP07510 517 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 SERPINA6P08185 405 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 CSTF2P33240 577 aaKnown RBP eCLIP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ARL1P40616 181 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 GABRA4P48169 554 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 RPL14P50914 215 aaKnown RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 SKP1P63208 163 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 RSPO4Q2I0M5 234 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ISXQ2M1V0 245 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 IGF2-ASQ6U949 168 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 TMPRSS9Q7Z410 1059 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 TRIM46Q7Z4K8 759 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ADCK2Q7Z695 626 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 TRIM73Q86UV7 250 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 CRLF3Q8IUI8 442 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 WDR75Q8IWA0 830 aaKnown RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 SRFBP1Q8NEF9 429 aaKnown RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 NT5CQ8TCD5 201 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 RERGQ96A58 199 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 CENPKQ9BS16 269 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ZPBPQ9BS86 351 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ELOVL6Q9H5J4 265 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 NMRK1Q9NWW6 199 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 TMEM9Q9P0T7 183 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 ATXN7L1Q9ULK2 861 aaPredicted RBP12.47□□□□□ -0.41
LIMS2-203ENST00000409254 CLCA2Q9UQC9 943 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 SCN3AQ9NY46 2000 aa12.47□□□□□ -0.41
LIMS2-203ENST00000409254 CCDC187A0A096LP49 1063 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 KIF1CO43896 1103 aaKnown RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CTSVO60911 334 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ULK1O75385 1050 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CRCPO75575 148 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 OR4F21O95013 312 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 MT-CO3P00414 261 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CAPN1P07384 714 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ACPPP15309 386 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ALOX15P16050 662 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 PRPH2P23942 346 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ARRB2P32121 409 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 IRX1P78414 480 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 RGS1Q08116 209 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CUL3Q13618 768 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ZRSR2Q15696 482 aaKnown RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ZIC1Q15915 447 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 SMU1Q2TAY7 513 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 ADPRMQ3LIE5 342 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 TMEM35AQ53FP2 167 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 PHF19Q5T6S3 580 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 HES3Q5TGS1 186 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CES4AQ5XG92 561 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 TLDC1Q6P9B6 456 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 SLCO6A1Q86UG4 719 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 METTL6Q8TCB7 284 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 MVB12AQ96EY5 273 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CMTM7Q96FZ5 175 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 TEFMQ96QE5 360 aaKnown RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 SYNDIG1Q9H7V2 258 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 CLK4Q9HAZ1 481 aaKnown RBP12.46□□□□□ -0.41
LIMS2-203ENST00000409254 FBXO8Q9NRD0 319 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 SRPK3Q9UPE1 567 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 RNF11Q9Y3C5 154 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 TRAF6Q9Y4K3 522 aa12.46□□□□□ -0.41
LIMS2-203ENST00000409254 TRPC5OSA6NMA1 111 aa12.45□□□□□ -0.42
LIMS2-203ENST00000409254 H3BMH7 237 aa12.45□□□□□ -0.42
LIMS2-203ENST00000409254 HDAC3O15379 428 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms