RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 KCTD4Q8WVF5 259 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 EXT2Q93063 718 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 NXNL1Q96CM4 212 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 MMABQ96EY8 250 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 PAFAH2Q99487 392 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 YIPF2Q9BWQ6 316 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 DRC3Q9H069 523 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 ING2Q9H160 280 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 SLC25A18Q9H1K4 315 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 CNOT10Q9H9A5 744 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 PELI2Q9HAT8 420 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 IGSF5Q9NSI5 407 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 CTSFQ9UBX1 484 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 A0A0A6YYC8 382 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TRBC2A0A5B9 178 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 I3L1I5 382 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TAPBPO15533 448 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 KALRNO60229 2985 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 UMODP07911 640 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 FAM153BP0C7A2 387 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 GGT5P36269 586 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 SLC6A12P48065 614 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 SERPINB8P50452 374 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 SERPINB9P50453 376 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 IRF9Q00978 393 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 CHAF1BQ13112 559 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 ATP1A4Q13733 1029 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 FAM53BQ14153 422 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 FAM83EQ2M2I3 478 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 FAM153CQ494X1 144 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TEX35Q5T0J7 233 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 NXPE4Q6UWF7 544 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 SHISA6Q6ZSJ9 500 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TRMT10CQ7L0Y3 403 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TAOK1Q7L7X3 1001 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TMEM151BQ8IW70 566 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 KLHDC8AQ8IYD2 350 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 ARHGEF39Q8N4T4 335 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 ZNF740Q8NDX6 193 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TM4SF19Q96DZ7 209 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 ABHD17AQ96GS6 310 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 IP6K3Q96PC2 410 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 SARGQ9BW04 601 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 ACSS2Q9NR19 701 aa17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 ZNF282Q9UDV7 671 aaPredicted RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 NXT1Q9UKK6 140 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 MRPS2Q9Y399 296 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 TLN1Q9Y490 2541 aaKnown RBP17.06■□□□□ 0.32
PDLIM2-206ENST00000409141 A0A096LPK6 155 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 MKRN2OSH3BPM6 223 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 PEX12O00623 359 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 FOXS1O43638 330 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 STK16O75716 305 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 DNAJB5O75953 348 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 KRT38O76015 456 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 ALDOAP04075 364 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SLC35G6P0C7Q6 338 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 GNAZP19086 355 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 AVPR1BP47901 424 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 HSPA7P48741 367 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CCL11P51671 97 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 NFATC3Q12968 1075 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 DSG2Q14126 1118 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 FBXO48Q5FWF7 155 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CPZQ66K79 652 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 TMPRSS11BQ86T26 416 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 C9orf43Q8TAL5 461 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 ESAMQ96AP7 390 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 MIEF2Q96C03 454 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SPSB2Q99619 263 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 AIF1LQ9BQI0 150 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 TMEM79Q9BSE2 394 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CAPS2Q9BXY5 557 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 VPS11Q9H270 941 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SOX17Q9H6I2 414 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 DNAJC11Q9NVH1 559 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 TRPC4Q9UBN4 977 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 PTBP2Q9UKA9 531 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CCDC88CQ9P219 2028 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SPTA1P02549 2419 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 VSTM2BA6NLU5 285 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SUPT3HB4E1H0 165 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 H2AFYO75367 372 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SUPT3HO75486 399 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 IPO13O94829 963 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SERPIND1P05546 499 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CSRP3P50461 194 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 RRADP55042 308 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 RBBP5Q15291 538 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 MED25Q71SY5 747 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 MRGPREQ86SM8 312 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 PRSS58Q8IYP2 241 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 CENPLQ8N0S6 344 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 TMEM102Q8N9M5 508 aaPredicted RBP17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 KCT2Q8NC54 265 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 PDPRQ8NCN5 879 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 OR9A4Q8NGU2 314 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 STT3BQ8TCJ2 826 aa17.05■□□□□ 0.32
PDLIM2-206ENST00000409141 SMG1Q96Q15 3661 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms