RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 NT5DC2Q9H857 520 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 RIC8BQ9NVN3 520 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 FTSJ1Q9UET6 329 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 GIMAP2Q9UG22 337 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 TSC22D4Q9Y3Q8 395 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 CCL27Q9Y4X3 112 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 MN1Q10571 1320 aaPredicted RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 TLCD2A6NGC4 264 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 C4orf47A7E2U8 309 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 MAGEB17A8MXT2 336 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 LCMT2O60294 686 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 PRAMEF10O60809 474 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 CTSVO60911 334 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 RPLP0P05388 317 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 CKMT2P17540 419 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 SCTRP47872 440 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 CYP4F2P78329 520 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 CYP4F3Q08477 520 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 CSTF3Q12996 717 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 IMPG1Q17R60 797 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 LSM12Q3MHD2 195 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 NXNQ6DKJ4 435 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 Q6ZSR9 355 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 ALYREFQ86V81 257 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 PLXDC1Q8IUK5 500 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 TBC1D19Q8N5T2 526 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 C19orf47Q8N9M1 422 aaKnown RBP19.62■□□□□ 0.73
CHKB-201ENST00000406938 ACTRT2Q8TDY3 377 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 FCRL4Q96PJ5 515 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 TRAPPC9Q96Q05 1148 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 CD180Q99467 661 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 NUDT22Q9BRQ3 303 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 RHBGQ9H310 441 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 AKTIPQ9H8T0 292 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 DMRT3Q9NQL9 472 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 C1GALT1Q9NS00 363 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 TMEM9Q9P0T7 183 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 KLHL3Q9UH77 587 aa19.62■□□□□ 0.73
CHKB-201ENST00000406938 COL5A1P20908 1838 aaPredicted RBP19.61■□□□□ 0.73
CHKB-201ENST00000406938 A0A1W2PQM1 296 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 SERTM1A2A2V5 107 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 E9PBE3 544 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 SLC28A1O00337 649 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 RGS14O43566 566 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 SH3BP5O60239 455 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 KLHL41O60662 606 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 C9P02748 559 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 PIK3CBP42338 1070 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 PHEXP78562 749 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 NR6A1Q15406 480 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 WDR74Q6RFH5 385 aaPredicted RBP19.61■□□□□ 0.73
CHKB-201ENST00000406938 LARP4Q71RC2 724 aaKnown RBP eCLIP19.61■□□□□ 0.73
CHKB-201ENST00000406938 GBP7Q8N8V2 638 aaPredicted RBP19.61■□□□□ 0.73
CHKB-201ENST00000406938 CCDC28BQ9BUN5 200 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 SYNPO2LQ9H987 977 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 BRF2Q9HAW0 419 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 HCN4Q9Y3Q4 1203 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 PCDHGA4Q9Y5G9 962 aa19.61■□□□□ 0.73
CHKB-201ENST00000406938 ANKDD1BA6NHY2 528 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 SLC9B1P1A6NJY1 282 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 PROB1E7EW31 1015 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 FOXE1O00358 373 aaPredicted RBP19.6■□□□□ 0.73
CHKB-201ENST00000406938 LSM1O15116 133 aaKnown RBP19.6■□□□□ 0.73
CHKB-201ENST00000406938 GDF9O60383 454 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 PEX11AO75192 247 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 VPS4BO75351 444 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 HSD3B1P14060 373 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 HSD3B2P26439 372 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 SERPINB1P30740 379 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 RPS15AP62244 130 aaKnown RBP19.6■□□□□ 0.73
CHKB-201ENST00000406938 RPS13P62277 151 aaKnown RBP19.6■□□□□ 0.73
CHKB-201ENST00000406938 CCL7P80098 99 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 ANKS4BQ8N8V4 417 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 TTLQ8NG68 377 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 CEP70Q8NHQ1 597 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 SYNDIG1Q9H7V2 258 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 PILRAQ9UKJ1 303 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 SLC12A4Q9UP95 1085 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 HEATR5BQ9P2D3 2071 aa19.6■□□□□ 0.73
CHKB-201ENST00000406938 IGHV5-51A0A0C4DH38 117 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 RASSF9O75901 435 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ETHE1O95571 254 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 PRR35P0CG20 571 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ACP1P24666 158 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 SQSTM1Q13501 440 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 GALNTL6Q49A17 601 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ATP6AP1LQ52LC2 224 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 RNF44Q7L0R7 432 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 MFSD9Q8NBP5 474 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ZFYVE21Q9BQ24 234 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 LRRN3Q9H3W5 708 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 HEY2Q9UBP5 337 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ADGRE2Q9UHX3 823 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ZFP69BQ9UJL9 534 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 ATXN7L1Q9ULK2 861 aaPredicted RBP19.59■□□□□ 0.73
CHKB-201ENST00000406938 ASXL3Q9C0F0 2248 aa19.59■□□□□ 0.73
CHKB-201ENST00000406938 A0A0J9YVX5 310 aa19.58■□□□□ 0.73
CHKB-201ENST00000406938 FOXD2O60548 495 aaPredicted RBP19.58■□□□□ 0.73
CHKB-201ENST00000406938 SH3BGRLO75368 114 aa19.58■□□□□ 0.73
CHKB-201ENST00000406938 RSL1D1O76021 490 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms