RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
SMCR8-201ENST00000406438 DENND2DQ9H6A0 471 aaPredicted RBP11.73□□□□□ -0.53
SMCR8-201ENST00000406438 MAGEE1Q9HCI5 957 aa11.73□□□□□ -0.53
SMCR8-201ENST00000406438 Q9N2J8 555 aa11.73□□□□□ -0.53
SMCR8-201ENST00000406438 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
SMCR8-201ENST00000406438 LMO2P25791 158 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 TUBA3CQ13748 450 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SEMA3AQ14563 771 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ANKRD26P1Q6NSI1 321 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SH3RF2Q8TEC5 729 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PCDHB18PQ96TA0 734 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 STRADBQ9C0K7 418 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF700Q9H0M5 742 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 VNN3Q9NY84 501 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 MKLN1Q9UL63 735 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 NOP16Q9Y3C1 178 aaKnown RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 MATN1P21941 496 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 KLF1Q13351 362 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ADGRF1Q5T601 910 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 CENPSQ8N2Z9 138 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 TOMM5Q8N4H5 51 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PTGES2Q9H7Z7 377 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 TIGARQ9NQ88 270 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 KIAA1217Q5T5P2 1943 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 CDKN1CP49918 316 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 WSCD2Q2TBF2 565 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SLC9B2Q86UD5 537 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 KIAA1143Q96AT1 154 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF599Q96NL3 588 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PCDHGA2Q9Y5H1 932 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 J3QLW9 94 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 KHNYNO15037 678 aaKnown RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PEX14O75381 377 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 VNN2O95498 520 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF19P17023 458 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SYT16Q17RD7 645 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 KIAA0930Q6ICG6 404 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 C3orf33Q6P1S2 294 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 DMRTB1Q96MA1 342 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 IGSF9Q9P2J2 1179 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF142P52746 1687 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 EME2A4GXA9 379 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 GPR89AB7ZAQ6 455 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 RNF13O43567 381 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 GPR89BP0CG08 455 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 VAMP1P23763 118 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PTGS2P35354 604 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 USF2Q15853 346 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 VMACQ2NL98 169 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 RBM20Q5T481 1227 aaKnown RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SLC51AQ86UW1 340 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 MFSD2AQ8NA29 543 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PKP4Q99569 1192 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 EFCAB11Q9BUY7 163 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ZNF226Q9NYT6 803 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ATPIF1Q9UII2 106 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 LOC100130705A0A1B0GUX0 176 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 BLOC1S5-TXNDC5H3BN57 136 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 JUNP05412 331 aaKnown RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 CASP6P55212 293 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SIRPB2Q5JXA9 342 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PRSS55Q6UWB4 352 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 SHKBP1Q8TBC3 707 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 PHOSPHO1Q8TCT1 267 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 TM9SF2Q99805 663 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.72□□□□□ -0.53
SMCR8-201ENST00000406438 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
SMCR8-201ENST00000406438 ANXA3P12429 323 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 RPL17P18621 184 aaKnown RBP11.71□□□□□ -0.53
SMCR8-201ENST00000406438 ST3GAL3Q11203 375 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 DPYSL2Q16555 572 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 ARSKQ6UWY0 536 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 GALNT15Q8N3T1 639 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 NAXEQ8NCW5 288 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 NECAB3Q96P71 396 aaPredicted RBP11.71□□□□□ -0.53
SMCR8-201ENST00000406438 LPIN3Q9BQK8 851 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 DPAGT1Q9H3H5 408 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 INSL6Q9Y581 213 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 TDRD6O60522 2096 aaKnown RBP11.71□□□□□ -0.53
SMCR8-201ENST00000406438 C13orf42A0A1B0GVH6 325 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 CHRM5P08912 532 aaPredicted RBP11.71□□□□□ -0.53
SMCR8-201ENST00000406438 MAN2A2P49641 1150 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 ARL9Q6T311 187 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 CERS5Q8N5B7 392 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 FITM2Q8N6M3 262 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 OR5AK3PQ8NH89 298 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 TUBGCP5Q96RT8 1024 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 IRF9Q00978 393 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 DUOXA1Q1HG43 343 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 SCGB1C1Q8TD33 95 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 TRIM43Q96BQ3 446 aaPredicted RBP11.71□□□□□ -0.53
SMCR8-201ENST00000406438 TTYH2Q9BSA4 534 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 SLC22A14Q9Y267 594 aa11.71□□□□□ -0.53
SMCR8-201ENST00000406438 SALL3Q9BXA9 1300 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms