RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PCDHGA7Q9Y5G6 932 aa28.05■■■□□ 2.08
USP42-202ENST00000404008 ATP8B1O43520 1251 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 SPTBP11277 2137 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 TSPAN8P19075 237 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 SCTRP47872 440 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 SERPINB4P48594 390 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 CCNG1P51959 295 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 NAA20P61599 178 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 TRAF3Q13114 568 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 RBBP7Q16576 425 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 PAGE2BQ5JRK9 111 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 LIPJQ5W064 366 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 TMIGD1Q6UXZ0 262 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 VN1R4Q7Z5H5 301 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 GPR135Q8IZ08 494 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 KRT78Q8N1N4 520 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 TRPC4APQ8TEL6 797 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 ATP6V1E2Q96A05 226 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 NT5DC2Q9H857 520 aa28.04■■■□□ 2.08
USP42-202ENST00000404008 PPP6CO00743 305 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 ASPHQ12797 758 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 WASHC2DQ5SRD0 308 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 GRHL2Q6ISB3 625 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 FRMD7Q6ZUT3 714 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 ANKRD42Q8N9B4 389 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 ANKRD53Q8N9V6 530 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 L3MBTL4Q8NA19 623 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 CDK15Q96Q40 435 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 STARD5Q9NSY2 213 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 IRAK4Q9NWZ3 460 aa28.03■■■□□ 2.08
USP42-202ENST00000404008 ZSCAN9O15535 394 aaPredicted RBP28.02■■■□□ 2.08
USP42-202ENST00000404008 SCRG1O75711 98 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 CLDN9O95484 217 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 OTCP00480 354 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 EIF2S1P05198 315 aaKnown RBP28.02■■■□□ 2.08
USP42-202ENST00000404008 SLC5A2P31639 672 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 AHRP35869 848 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 HNF4AP41235 474 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 LCP2Q13094 533 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 RBBP5Q15291 538 aaKnown RBP28.02■■■□□ 2.08
USP42-202ENST00000404008 CFAP157Q5JU67 520 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 TLDC1Q6P9B6 456 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 TMEM126BQ8IUX1 230 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 CSNK1A1LQ8N752 337 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 TM4SF19Q96DZ7 209 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 GATA5Q9BWX5 397 aaPredicted RBP28.02■■■□□ 2.08
USP42-202ENST00000404008 ZFP69BQ9UJL9 534 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 ZNF490Q9ULM2 529 aaPredicted RBP28.02■■■□□ 2.08
USP42-202ENST00000404008 RNF11Q9Y3C5 154 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 PCDHB3Q9Y5E6 796 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 AP1M2Q9Y6Q5 423 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 SDK2Q58EX2 2172 aa28.02■■■□□ 2.08
USP42-202ENST00000404008 A0A1B0GTL3 188 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 FITM1A5D6W6 292 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 BIRC5O15392 142 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 P2RX6O15547 441 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 MLYCDO95822 493 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 ZNF28P17035 718 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 ARL1P40616 181 aaPredicted RBP28.01■■■□□ 2.07
USP42-202ENST00000404008 ERVPABLB-1P60509 514 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 HIST2H2ACQ16777 129 aaPredicted RBP28.01■■■□□ 2.07
USP42-202ENST00000404008 PRAMEF17Q5VTA0 474 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 HIST2H2AA3Q6FI13 130 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.01■■■□□ 2.07
USP42-202ENST00000404008 ZNF655Q8N720 491 aaPredicted RBP28.01■■■□□ 2.07
USP42-202ENST00000404008 SREK1Q8WXA9 508 aaKnown RBP28.01■■■□□ 2.07
USP42-202ENST00000404008 GATA6Q92908 595 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 ZNF382Q96SR6 550 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 MLXIPLQ9NP71 852 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 THSD1Q9NS62 852 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 STK38LQ9Y2H1 464 aa28.01■■■□□ 2.07
USP42-202ENST00000404008 ZNF749O43361 778 aa28■■■□□ 2.07
USP42-202ENST00000404008 HPDP32754 393 aaPredicted RBP28■■■□□ 2.07
USP42-202ENST00000404008 GCGRP47871 477 aa28■■■□□ 2.07
USP42-202ENST00000404008 WDR4P57081 412 aaKnown RBP28■■■□□ 2.07
USP42-202ENST00000404008 HKDC1Q2TB90 917 aa28■■■□□ 2.07
USP42-202ENST00000404008 PRTGQ2VWP7 1150 aa28■■■□□ 2.07
USP42-202ENST00000404008 ASPGQ86U10 573 aa28■■■□□ 2.07
USP42-202ENST00000404008 MYLK4Q86YV6 388 aaPredicted RBP28■■■□□ 2.07
USP42-202ENST00000404008 NUDCD3Q8IVD9 361 aa28■■■□□ 2.07
USP42-202ENST00000404008 OR4F6Q8NGB9 312 aa28■■■□□ 2.07
USP42-202ENST00000404008 UBE2E3Q969T4 207 aa28■■■□□ 2.07
USP42-202ENST00000404008 ZNF578Q96N58 590 aaPredicted RBP28■■■□□ 2.07
USP42-202ENST00000404008 ULBP3Q9BZM4 244 aa28■■■□□ 2.07
USP42-202ENST00000404008 NKIRAS1Q9NYS0 192 aa28■■■□□ 2.07
USP42-202ENST00000404008 ZNF225Q9UK10 706 aa28■■■□□ 2.07
USP42-202ENST00000404008 STATHP02808 62 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 GRM7Q14831 915 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 GGTA1PQ4G0N0 100 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 HHATQ5VTY9 493 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 LETMD1Q6P1Q0 360 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 MED27Q6P2C8 311 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 MILR1Q7Z6M3 343 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 LAS2Q8IYD9 372 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 TTLQ8NG68 377 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 RNF31Q96EP0 1072 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 TMEM121BQ9BXQ6 578 aaPredicted RBP27.99■■■□□ 2.07
USP42-202ENST00000404008 SPRY4Q9C004 299 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 RHBGQ9H310 441 aa27.99■■■□□ 2.07
USP42-202ENST00000404008 ACSL6Q9UKU0 697 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms