RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 TRBC2A0A5B9 178 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 PABPN1LA6NDY0 278 aaKnown RBP15.87■□□□□ 0.13
APTR-201ENST00000398043 STATHP02808 62 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 MMP11P24347 488 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 OTX2P32243 289 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 GDF5P43026 501 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 CCR8P51685 355 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 MEF2AQ02078 507 aaPredicted RBP15.87■□□□□ 0.13
APTR-201ENST00000398043 DSG2Q14126 1118 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 CSHL1Q14406 222 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 CENPLQ8N0S6 344 aaPredicted RBP15.87■□□□□ 0.13
APTR-201ENST00000398043 STT3BQ8TCJ2 826 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 SLC44A1Q8WWI5 657 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 SLC5A11Q8WWX8 675 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 MACROD1Q9BQ69 325 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 DRC3Q9H069 523 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 L2HGDHQ9H9P8 463 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 PELI2Q9HAT8 420 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 ZNF71Q9NQZ8 489 aaPredicted RBP15.87■□□□□ 0.13
APTR-201ENST00000398043 NXT1Q9UKK6 140 aaKnown RBP15.87■□□□□ 0.13
APTR-201ENST00000398043 CDC14AQ9UNH5 594 aa15.87■□□□□ 0.13
APTR-201ENST00000398043 PCDHGA9Q9Y5G4 932 aaKnown RBP15.87■□□□□ 0.13
APTR-201ENST00000398043 CPAMD8Q8IZJ3 1885 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 A0A0A6YYC8 382 aaPredicted RBP15.86■□□□□ 0.13
APTR-201ENST00000398043 MKRN2OSH3BPM6 223 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 I3L1I5 382 aaPredicted RBP15.86■□□□□ 0.13
APTR-201ENST00000398043 SOCS6O14544 535 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 SUV39H1O43463 412 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 ALDOAP04075 364 aaKnown RBP15.86■□□□□ 0.13
APTR-201ENST00000398043 ZGLP1P0C6A0 271 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 NR1D1P20393 614 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 CRABP2P29373 138 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 PHBP35232 272 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 SCTRP47872 440 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 REEP5Q00765 189 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 BMPR2Q13873 1038 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 SLMAPQ14BN4 828 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 MROH9Q5TGP6 573 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 NXPE4Q6UWF7 544 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 FRA10AC1Q70Z53 315 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 PRSS41Q7RTY9 318 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 LAPTM4BQ86VI4 370 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 GPSM1Q86YR5 675 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 SHISA5Q8N114 240 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 KCT2Q8NC54 265 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 PDPRQ8NCN5 879 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 COL26A1Q96A83 441 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 MOCOSQ96EN8 888 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 TSNARE1Q96NA8 513 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 ATOH8Q96SQ7 321 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 EGFL8Q99944 293 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 MESP1Q9BRJ9 268 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 TGIF2Q9GZN2 237 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 SOX17Q9H6I2 414 aaPredicted RBP15.86■□□□□ 0.13
APTR-201ENST00000398043 ACSS2Q9NR19 701 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 P4HTMQ9NXG6 502 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 ZNF282Q9UDV7 671 aaPredicted RBP15.86■□□□□ 0.13
APTR-201ENST00000398043 PTBP2Q9UKA9 531 aaKnown RBP15.86■□□□□ 0.13
APTR-201ENST00000398043 NFU1Q9UMS0 254 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 HS3ST3B1Q9Y662 390 aa15.86■□□□□ 0.13
APTR-201ENST00000398043 SHANK1Q9Y566 2161 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 AGPSO00116 658 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 PRAMEF4O60810 478 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 NSA2O95478 260 aaKnown RBP15.85■□□□□ 0.13
APTR-201ENST00000398043 ACSL3O95573 720 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 C2P06681 752 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 LTA4HP09960 611 aaKnown RBP15.85■□□□□ 0.13
APTR-201ENST00000398043 PLA2G2AP14555 144 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 FBLP22087 321 aaKnown RBP15.85■□□□□ 0.13
APTR-201ENST00000398043 CCL11P51671 97 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 EFNA3P52797 238 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 SOX8P57073 446 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 KLC1Q07866 573 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 LACTB2Q53H82 288 aaPredicted RBP15.85■□□□□ 0.13
APTR-201ENST00000398043 VWA2Q5GFL6 755 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 DCAF10Q5QP82 559 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 PRAMEF9Q5VWM5 478 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 KIRREL2Q6UWL6 708 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 SLCO4C1Q6ZQN7 724 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 SHISA6Q6ZSJ9 500 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 CCDC91Q7Z6B0 441 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 ASPGQ86U10 573 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 AFAP1L2Q8N4X5 818 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 ANKRD53Q8N9V6 530 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 CAMKVQ8NCB2 501 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 SLC13A3Q8WWT9 602 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 ISL2Q96A47 359 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 MMABQ96EY8 250 aaPredicted RBP15.85■□□□□ 0.13
APTR-201ENST00000398043 TXLNGYQ9BZA5 131 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 SNX15Q9NRS6 342 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 SEMA3GQ9NS98 782 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 COPG2Q9UBF2 871 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 MAP4K5Q9Y4K4 846 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 KCNE2Q9Y6J6 123 aa15.85■□□□□ 0.13
APTR-201ENST00000398043 NCF1BA6NI72 391 aaPredicted RBP15.84■□□□□ 0.13
APTR-201ENST00000398043 NCF1CA8MVU1 366 aaPredicted RBP15.84■□□□□ 0.13
APTR-201ENST00000398043 H0YIG0 161 aa15.84■□□□□ 0.13
APTR-201ENST00000398043 MASP2O00187 686 aa15.84■□□□□ 0.13
APTR-201ENST00000398043 FFAR3O14843 346 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms