RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 APIPQ96GX9 242 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 SERPINI1Q99574 410 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 ACTL8Q9H568 366 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 NMRK1Q9NWW6 199 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 HRASLS2Q9NWW9 162 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 NLGN3Q9NZ94 848 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC6A14Q9UN76 642 aa18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 EIF3LQ9Y262 564 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-205ENST00000397761 CFIP05156 583 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 G6PDP11413 515 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 AHRP35869 848 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 ZFP36L2P47974 494 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 MNAT1P51948 309 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 EPHA4P54764 986 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 GALNT18Q6P9A2 607 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 CYP20A1Q6UW02 462 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 ZNF761Q86XN6 746 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 POU5F2Q8N7G0 328 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 OR9I1Q8NGQ6 314 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 OR10G6Q8NH81 332 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 TSPEARQ8WU66 669 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 PRRX2Q99811 253 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 MS4A8Q9BY19 250 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 LRMDAQ9H2I8 198 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 POMT2Q9UKY4 750 aa18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 POLR3HQ9Y535 204 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-205ENST00000397761 VPS13AQ96RL7 3174 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 GSAPA4D1B5 854 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 ANKDD1BA6NHY2 528 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 HAT1O14929 419 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 NUDT21O43809 227 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 LCMT2O60294 686 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 NRP2O60462 931 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 CLEC3AO75596 197 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 UBXN7O94888 489 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 SEMA3DO95025 777 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 EPN2O95208 641 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 PRPS2P11908 318 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 BCKDHAP12694 445 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 JAK1P23458 1154 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 PTX3P26022 381 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 MAPK1P28482 360 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 GRK3P35626 688 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 PLA2G5P39877 138 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 CAPZBP47756 277 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 RASSF2P50749 326 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 NR1D2Q14995 579 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 RBBP5Q15291 538 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 MAPRE2Q15555 327 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 AGKQ53H12 422 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 SPIN4Q56A73 249 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 PAOXQ6QHF9 649 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 PRR23BQ6ZRT6 265 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 USP34Q70CQ2 3546 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 SNX32Q86XE0 403 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC35F3Q8IY50 421 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 PROKR1Q8TCW9 393 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 CREB3L4Q8TEY5 395 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 RSC1A1Q92681 617 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 ZUFSPQ96AP4 578 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC52A3Q9NQ40 469 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 RUVBL1Q9Y265 456 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 DLGAP4Q9Y2H0 992 aa18.66■□□□□ 0.58
PDLIM2-205ENST00000397761 FEZF1A0PJY2 475 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PATE3B3GLJ2 98 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 OR1F1O43749 312 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PTPN4P29074 926 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 BCL6P41182 706 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 LSSP48449 732 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 CYLC2Q14093 348 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 RPS6KA2Q15349 733 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 ZIC1Q15915 447 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 TRIM61Q5EBN2 209 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 CACHD1Q5VU97 1274 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 NOXRED1Q6NXP6 359 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 BLOC1S3Q6QNY0 202 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 ADCK2Q7Z695 626 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 FAM9CQ8IZT9 166 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 TBC1D19Q8N5T2 526 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 MFSD9Q8NBP5 474 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PRSS33Q8NF86 280 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 DUSP23Q9BVJ7 150 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 MRPL1Q9BYD6 325 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 RAB33BQ9H082 229 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 C1orf21Q9H246 121 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 EVA1BQ9NVM1 165 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 CCDC167Q9P0B6 97 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PCDHGA5Q9Y5G8 931 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PCDHGA4Q9Y5G9 962 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 AP1M2Q9Y6Q5 423 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 WDR87Q6ZQQ6 2873 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 A0A0J9YY10 115 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 LOC100653049A0A140TA62 436 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 ARHGAP33O14559 1287 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC22A3O75751 556 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 KRT34O76011 436 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 EZRP15311 586 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 SDC1P18827 310 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 MAGP20916 626 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms