RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZSCAN1Q8NBB4 408 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 BPIFB6Q8NFQ5 453 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 ARRDC3Q96B67 414 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 F2RL3Q96RI0 385 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 FOXQ1Q9C009 403 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 LRMDAQ9H2I8 198 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 CER1O95813 267 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 IFNGP01579 166 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 CD9P21926 228 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 FDXRP22570 491 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 CTSCP53634 463 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 MRPS35P82673 323 aaKnown RBP14.88□□□□□ -0.03
LSS-202ENST00000397728 LIPJQ5W064 366 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 CLN6Q9NWW5 311 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 IL1RNP18510 177 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 FBLP22087 321 aaKnown RBP14.88□□□□□ -0.03
LSS-202ENST00000397728 AHCYP23526 432 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 PSMD7P51665 324 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 LGALS3BPQ08380 585 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 ZNF763Q0D2J5 394 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 RPA4Q13156 261 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 NEDD8Q15843 81 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 FAM220AQ7Z4H9 259 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 DCP2Q8IU60 420 aaKnown RBP14.88□□□□□ -0.03
LSS-202ENST00000397728 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.88□□□□□ -0.03
LSS-202ENST00000397728 ACVR1CQ8NER5 493 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 OR4K14Q8NGD5 310 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 ROPN1LQ96C74 230 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 NSMCE3Q96MG7 304 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 CAMK1GQ96NX5 476 aa14.88□□□□□ -0.03
LSS-202ENST00000397728 TMEM265A0A087WTH1 108 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 MYOCOSA0A1B0GUC4 107 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 CAPN14A8MX76 684 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 MATN2O00339 956 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 TRAPPC6AO75865 159 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 MRPS15P82914 257 aaKnown RBP14.87□□□□□ -0.03
LSS-202ENST00000397728 ANKRD26P1Q6NSI1 321 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 OR4K1Q8NGD4 311 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 RORBQ92753 470 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 PPP1R14AQ96A00 147 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 S100A13Q99584 98 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 LAMA4Q16363 1823 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 FAM86C2PA6NEL3 165 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 SCELO95171 688 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 CLPTM1O96005 669 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 PGFP49763 221 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 LASP1Q14847 261 aaKnown RBP14.87□□□□□ -0.03
LSS-202ENST00000397728 TRIM61Q5EBN2 209 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 DCST1Q5T197 706 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 SVOPQ8N4V2 548 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 OR4K17Q8NGC6 315 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 THAP3Q8WTV1 239 aaPredicted RBP14.87□□□□□ -0.03
LSS-202ENST00000397728 ZHX1-C8orf76Q96EF9 292 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 ZNF382Q96SR6 550 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 METTL7AQ9H8H3 244 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 NECTIN3Q9NQS3 549 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 MS4A12Q9NXJ0 267 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 WASF2Q9Y6W5 498 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 KIAA1551Q9HCM1 1747 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 hCG_2039718K7EN88 272 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 GSC2O15499 205 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 FABP3P05413 133 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 CCDC159P0C7I6 412 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 SRFP11831 508 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 HYAL1Q12794 435 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 BNIPLQ7Z465 357 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 RNFT2Q96EX2 444 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.87□□□□□ -0.031e-6■□□□□ 10
LSS-202ENST00000397728 EPS8L2Q9H6S3 715 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 PRSS38A1L453 326 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 TNFRSF11BO00300 401 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 GRM7Q14831 915 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 DECR1Q16698 335 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 CATSPEREQ5SY80 951 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 NIPAL1Q6NVV3 410 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 Q7L0L9 218 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 DEPDC4Q8N2C3 294 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 ZNF527Q8NB42 609 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 CDADC1Q9BWV3 514 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 TESMINQ9Y4I5 508 aa14.87□□□□□ -0.03
LSS-202ENST00000397728 A6NCN8 305 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 PRORSD1PA6NEY8 169 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 RTCAO00442 366 aaKnown RBP14.86□□□□□ -0.03
LSS-202ENST00000397728 CXCR6O00574 342 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 RNH1P13489 461 aaKnown RBP14.86□□□□□ -0.03
LSS-202ENST00000397728 KCNC1P48547 511 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 CCT3P49368 545 aaKnown RBP14.86□□□□□ -0.03
LSS-202ENST00000397728 CDH12P55289 794 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 DSTNP60981 165 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 UFM1P61960 85 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.86□□□□□ -0.03
LSS-202ENST00000397728 SPANXN4Q5MJ08 99 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 STEAP4Q687X5 459 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 CCDC116Q8IYX3 515 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 EID2Q8N6I1 236 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 OR9I1Q8NGQ6 314 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 KCNC2Q96PR1 638 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 RNPEPL1Q9HAU8 725 aa14.86□□□□□ -0.03
LSS-202ENST00000397728 FBRSL1Q9HCM7 1045 aaKnown RBP14.86□□□□□ -0.03
LSS-202ENST00000397728 PDP1Q9P0J1 537 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms