RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 BTRCQ9Y297 605 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 POP7O75817 140 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 THRBP10828 461 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OPRD1P41143 372 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 KIR2DL1P43626 348 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CYP4F8P98187 520 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 APOFQ13790 326 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DOC2AQ14183 400 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 HKDC1Q2TB90 917 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ACCSLQ4AC99 568 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PRAMEF14Q5SWL7 426 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PRAMEF13Q5VWM6 474 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF425Q6IV72 752 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ATG14Q6ZNE5 492 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DEPDC4Q8N2C3 294 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PPWD1Q96BP3 646 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 MIEF2Q96C03 454 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CATSPER2Q96P56 530 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 REEP4Q9H6H4 257 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZDHHC6Q9H6R6 413 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SERHLQ9NQF3 203 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GPR27Q9NS67 375 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SLC22A7Q9Y694 548 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ANKRD65E5RJM6 399 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 DFNA5O60443 496 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ETS2P15036 469 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RYKP34925 604 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CA8P35219 290 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 IRS1P35568 1242 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 PCBP3P57721 371 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 PFN3P60673 137 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 KEAP1Q14145 624 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CEBPEQ15744 281 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 TMEM196Q5HYL7 178 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 LPCAT4Q643R3 524 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 GRASPQ7Z6J2 395 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 KRT73Q86Y46 540 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RNF135Q8IUD6 432 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 OR52E6Q96RD3 313 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CHD9Q3L8U1 2897 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 NPEPPSL1A6NEC2 478 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RFXANKO14593 260 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 SEC22BO75396 215 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 KITP10721 976 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ATP6V1E1P36543 226 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ALDH9A1P49189 494 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ARSFP54793 590 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 REEP5Q00765 189 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF234Q14588 700 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 PNCKQ6P2M8 343 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 COQ7Q99807 217 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RAB33BQ9H082 229 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 DUSP21Q9H596 190 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 NUMBLQ9Y6R0 609 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 IRGMA1A4Y4 181 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 K7ERQ8 282 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 OXSR1O95747 527 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CLPTM1O96005 669 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CA3P07451 260 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RPS9P46781 194 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CYP4F3Q08477 520 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 TIMM50Q3ZCQ8 353 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RBM48Q5RL73 367 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 VWA5B1Q5TIE3 1220 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 OR52E8Q6IFG1 317 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CLEC4FQ8N1N0 589 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ITFG1Q8TB96 612 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 WBP2Q969T9 261 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 C3orf30Q96M34 536 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 TEFMQ96QE5 360 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 DUSP26Q9BV47 211 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ADPRHL2Q9NX46 363 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF490Q9ULM2 529 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 AP4B1Q9Y6B7 739 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 SPACA6W5XKT8 324 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 DOCK9Q9BZ29 2069 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 OR2AG2A6NM03 316 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CAPN5O15484 640 aaPredicted RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 TSPAN3O60637 253 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF217O75362 1048 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 SLC16A8O95907 504 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 NPPBP16860 134 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 AMD1P17707 334 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 EPORP19235 508 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ALDH3B2P48448 385 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 NXPE4Q6UWF7 544 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 CLDN22Q8N7P3 220 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 SIDT2Q8NBJ9 832 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RIOK2Q9BVS4 552 aaKnown RBP5.65□□□□□ -1.5
PTPRD-206ENST00000397617 BTBD1Q9H0C5 482 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 WDR70Q9NW82 654 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 ENTPD4Q9Y227 616 aa5.65□□□□□ -1.5
PTPRD-206ENST00000397617 RNF103-CHMP3A0A140T963 221 aa5.65□□□□□ -1.51
PTPRD-206ENST00000397617 MAGEB17A8MXT2 336 aa5.65□□□□□ -1.51
PTPRD-206ENST00000397617 ZW10O43264 779 aa5.65□□□□□ -1.51
PTPRD-206ENST00000397617 PLRG1O43660 514 aaKnown RBP5.65□□□□□ -1.51
PTPRD-206ENST00000397617 SERPINB7O75635 380 aa5.65□□□□□ -1.51
PTPRD-206ENST00000397617 G6PDP11413 515 aa5.65□□□□□ -1.51
PTPRD-206ENST00000397617 EPCAMP16422 314 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms