RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ERICH4A6NGS2 130 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 TMX2-CTNND1H3BSU7 103 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 TERTO14746 1132 aaKnown RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 CAPN1P07384 714 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 NPPBP16860 134 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 EPORP19235 508 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 SERPINB3P29508 390 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 FOXA1P55317 472 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 UBE2IP63279 158 aaKnown RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 CHIT1Q13231 466 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 EIF3IQ13347 325 aaKnown RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 TGIF1Q15583 401 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 VWA5B1Q5TIE3 1220 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 EPGNQ6UW88 154 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 RAB11FIP2Q7L804 512 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 MAVSQ7Z434 540 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 AMIGO1Q86WK6 493 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 DDIASQ8IXT1 998 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 RBM12BQ8IXT5 1001 aaKnown RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 LMNTD1Q8N9Z9 388 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 OR4E2Q8NGC2 313 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 TWIST2Q8WVJ9 160 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 OR4K3Q96R72 315 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 SRMSQ9H3Y6 488 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 OR6C2Q9NZP2 312 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 RNF11Q9Y3C5 154 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 TIMM22Q9Y584 194 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 HEMK1Q9Y5R4 338 aaPredicted RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 DNAJC15Q9Y5T4 150 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 BOD1L1Q8NFC6 3051 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 FLNCQ14315 2725 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 E7EQ34 232 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 ZNF195O14628 629 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 UGDHO60701 494 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 ITGB2P05107 769 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 IDH3AP50213 366 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 CCL7P80098 99 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 HHEXQ03014 270 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 BTKQ06187 659 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 SRSF1Q07955 248 aaKnown RBP eCLIP12.73□□□□□ -0.37
SEC13-209ENST00000397117 SRSF6Q13247 344 aaKnown RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 GPR18Q14330 331 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 GGTA1PQ4G0N0 100 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 LIPJQ5W064 366 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 LCTLQ6UWM7 567 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 ACAD11Q709F0 780 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 USP53Q70EK8 1073 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 C17orf64Q86WR6 236 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 ARL10Q8N8L6 244 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 L3MBTL4Q8NA19 623 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 LINC01555Q8NAE3 123 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 HMGCLL1Q8TB92 370 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 SLC5A11Q8WWX8 675 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 NEIL2Q969S2 332 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 C19orf60Q96EN9 201 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
SEC13-209ENST00000397117 NRTNQ99748 197 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 CCT7Q99832 543 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 ACAT2Q9BWD1 397 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 SLC29A3Q9BZD2 475 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 TAC3Q9UHF0 121 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 PCDHB11Q9Y5F2 797 aa12.73□□□□□ -0.37
SEC13-209ENST00000397117 A0A1W2PQM1 296 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 NVLO15381 856 aaKnown RBP12.72□□□□□ -0.37
SEC13-209ENST00000397117 KRT6AP02538 564 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 KRT6BP04259 564 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 CCKBRP32239 447 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 KRT6CP48668 564 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 INHBCP55103 352 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 CPSF6Q16630 551 aaKnown RBP eCLIP12.72□□□□□ -0.37
SEC13-209ENST00000397117 UGT3A2Q3SY77 523 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 SLC9B1Q4ZJI4 515 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 NXNQ6DKJ4 435 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 TMPRSS11BQ86T26 416 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 KYQ8NBH2 561 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 JPH3Q8WXH2 748 aaPredicted RBP12.72□□□□□ -0.37
SEC13-209ENST00000397117 EXTL1Q92935 676 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 EBF4Q9BQW3 602 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 TRIM4Q9C037 500 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 STRADBQ9C0K7 418 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 ELOVL6Q9H5J4 265 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 SYNDIG1Q9H7V2 258 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 MEAF6Q9HAF1 191 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 HEY2Q9UBP5 337 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 SNX6Q9UNH7 406 aa12.72□□□□□ -0.37
SEC13-209ENST00000397117 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 D6RAR5 112 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 EBAG9O00559 213 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 FFAR3O14843 346 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 PIP5K1BO14986 540 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 GPR42O15529 346 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 SUV39H1O43463 412 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 ULK1O75385 1050 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 DCTN3O75935 186 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 WFS1O76024 890 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms