RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 CHST11Q9NPF2 352 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 OR6C2Q9NZP2 312 aa4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 FAF1Q9UNN5 650 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P10-201ENST00000395823 RNF103-CHMP3A0A140T963 221 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 C2orf92A0A1B0GVN3 265 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 TMEM129A0AVI4 362 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 MAGEB16A2A368 324 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 MTMR11A4FU01 709 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 RNF103O00237 685 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 REC8O95072 547 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 IGHV4-38-2P0DP08 117 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 UGT1A6P19224 532 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 IL10P22301 178 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 LHCGRP22888 699 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 CA6P23280 308 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 MARK3P27448 753 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 DCTP40126 519 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 ATXN3P54252 364 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 EXT1Q16394 746 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 NADSYN1Q6IA69 706 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 UGT3A1Q6NUS8 523 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 C5orf24Q7Z6I8 188 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRUNE1Q86TP1 453 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 ISCA2Q86U28 154 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 LCA5Q86VQ0 697 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 TMEM126BQ8IUX1 230 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 CCDC60Q8IWA6 550 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 SMYD1Q8NB12 490 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 NUDCD2Q8WVJ2 157 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 PRCCQ92733 491 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 TRIM44Q96DX7 344 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 ALG14Q96F25 216 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 EEF2KMTQ96G04 330 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZPBPQ9BS86 351 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZNF577Q9BSK1 485 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 IDI2Q9BXS1 227 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 PANK2Q9BZ23 570 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 DONSONQ9NYP3 566 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 AGTPBP1Q9UPW5 1226 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 FOXA2Q9Y261 457 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 ZNF510Q9Y2H8 683 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 TMED7Q9Y3B3 224 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 STRAPQ9Y3F4 350 aaKnown RBP4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 R4GN57 208 aa4.53□□□□□ -1.68
HMGB1P10-201ENST00000395823 E5RGE8 158 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 OVOL3O00110 214 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 SCO2O43819 266 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ATP1B1P05026 303 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 CCNA2P20248 432 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ALDH4A1P30038 563 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 SFTPDP35247 375 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 PEX19P40855 299 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 THBS3P49746 956 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 DVL1P1P54792 670 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 CETN1Q12798 172 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 GK2Q14410 553 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 RBM39Q14498 530 aaKnown RBP4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 OPCMLQ14982 345 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 P2RY6Q15077 328 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ACKR1Q16570 336 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZNF542PQ5EBM4 170 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 TOR1AIP1Q5JTV8 583 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR4C11Q6IEV9 310 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ISLR2Q6UXK2 745 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZNF771Q7L3S4 317 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 NFE4Q86UQ8 179 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 HSCBQ8IWL3 235 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 LMNTD2Q8IXW0 634 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZC3H3Q8IXZ2 948 aaKnown RBP4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 RCOR2Q8IZ40 523 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 KBTBD8Q8NFY9 601 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 OR13A1Q8NGR1 328 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 EXOC6Q8TAG9 804 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 LMO3Q8TAP4 145 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 FCAMRQ8WWV6 532 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 GGHQ92820 318 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 VOPP1Q96AW1 172 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 SENP5Q96HI0 755 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 NSL1Q96IY1 281 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 THAP2Q9H0W7 228 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 CPVLQ9H3G5 476 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZDHHC6Q9H6R6 413 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 PDRG1Q9NUG6 133 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 TRIM10Q9UDY6 481 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 TNNQ9UQP3 1299 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 NSG2Q9Y328 171 aa4.52□□□□□ -1.69
HMGB1P10-201ENST00000395823 IL16Q14005 1332 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 TRBV2A0A0J9YWF9 115 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 LACTBL1A8MY62 500 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 C16orf97H3BN30 126 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 STBD1O95210 358 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 NTN1O95631 604 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 BMP15O95972 392 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 NUDT17P0C025 328 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 SKILP12757 684 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 RPA1P27694 616 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 CAMLGP49069 296 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 CLDN17P56750 224 aa4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 RPP38P78345 283 aaKnown RBP4.51□□□□□ -1.69
HMGB1P10-201ENST00000395823 ZXDBP98169 803 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms