RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 ERVW-1Q9UQF0 538 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 ASF1AQ9Y294 204 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 ZNF451Q9Y4E5 1061 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SIP14410 1827 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 EIF3FO00303 357 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 TFECO14948 347 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 MRPS14O60783 128 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SRPRAP08240 638 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 PRR35P0CG20 571 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 CDK6Q00534 326 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 PTPRRQ15256 657 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 C22orf39Q6P5X5 142 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 RAB43Q86YS6 212 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 KCNS3Q9BQ31 491 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 HEPHQ9BQS7 1158 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 DOHHQ9BU89 302 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SPATA9Q9BWV2 254 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 ELAC1Q9H777 363 aaKnown RBP11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 PDFQ9HBH1 243 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 C11orf16Q9NQ32 467 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 TOR4AQ9NXH8 423 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SEC14L3Q9UDX4 400 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 ASB1Q9Y576 335 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SLC16A5O15375 505 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SLC28A2O43868 658 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 TMEM220Q6QAJ8 160 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SERPINA11Q86U17 422 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 GPR65Q8IYL9 337 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 SPATA5L1Q9BVQ7 753 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 FNDC11Q9BVV2 318 aa11.29□□□□□ -0.6
UBE2D3-209ENST00000394804 A0A1W2PRB8 838 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 UGT2B17O75795 530 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 VIPP01282 170 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 LCKP06239 509 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 PFKLP17858 780 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 AZGP1P25311 298 aaKnown RBP11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 PRKAG1P54619 331 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ZNF45Q02386 682 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 DMPKQ09013 629 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 KCNC3Q14003 757 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 MAD2L1BPQ15013 274 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CPZQ66K79 652 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 SUSD1Q6UWL2 747 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 TSPAN33Q86UF1 283 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ZSWIM9Q86XI8 627 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CLECL1Q8IZS7 167 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 TRIM63Q969Q1 353 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 MAPKAP1Q9BPZ7 522 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 SLC12A9Q9BXP2 914 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 NEU3Q9UQ49 428 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 PRSS21Q9Y6M0 314 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 UPK3BL1B0FP48 263 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 UPK3BL2E5RIL1 263 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CYP7B1O75881 506 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 LATS1O95835 1130 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 TCF3P15923 654 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 TNNI3P19429 210 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CSRP3P50461 194 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ZFP69Q49AA0 526 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 TUBA3EQ6PEY2 450 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 FAM131AQ6UXB0 335 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 GDPD4Q6W3E5 623 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 RIMKLAQ8IXN7 391 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CFAP206Q8IYR0 622 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 NFKBIDQ8NI38 313 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CNPPD1Q9BV87 410 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CCDC177Q9NQR7 707 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 LHX3Q9UBR4 397 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 FAM25GB3EWG6 89 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 PRLP01236 227 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 NTSP30990 170 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 EMP3P54852 163 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 COPZ1P61923 177 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 FAM189BP81408 668 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 PPP2R2BQ00005 443 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CREMQ03060 361 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ST3GAL4Q11206 333 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 ZNF544Q6NX49 715 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 B3GNT8Q7Z7M8 397 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 C17orf64Q86WR6 236 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CMTM8Q8IZV2 173 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 APCDD1Q8J025 514 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 CLIP4Q8N3C7 705 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 NUDT8Q8WV74 236 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 AP3S1Q92572 193 aa11.28□□□□□ -0.6
UBE2D3-209ENST00000394804 TESCQ96BS2 214 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms