RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 IFI44LQ53G44 452 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 SPIN4Q56A73 249 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CPTPQ5TA50 214 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 SLX4IPQ5VYV7 408 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 TPGS2Q68CL5 300 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CCSAPQ6IQ19 270 aaPredicted RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 PDE12Q6L8Q7 609 aaKnown RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 IFNL1Q8IU54 200 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 NAT16Q8N8M0 369 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 TTC16Q8NEE8 873 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 FLCNQ8NFG4 579 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 ZNF675Q8TD23 568 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 REPS1Q96D71 796 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 B3GALT6Q96L58 329 aa9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 CNOT2Q9NZN8 540 aaKnown RBP9.71□□□□□ -0.85
UBE2D3-208ENST00000394803 GFYI3L273 518 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 DYRK3O43781 588 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 AP2A2O94973 939 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 PRAMEF12O95522 483 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 RRM2P31350 389 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 TIE1P35590 1138 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 SNRPD1P62314 119 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 SELENOWP63302 87 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 KCNJ8Q15842 424 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 CDKN3Q16667 212 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 UGT8Q16880 541 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 VTCN1Q7Z7D3 282 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 SLC44A2Q8IWA5 706 aaPredicted RBP9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 NPAS3Q8IXF0 933 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 C10orf111Q8N326 155 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 OR10G2Q8NGC3 310 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 SETD6Q8TBK2 473 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 CLP1Q92989 425 aaKnown RBP9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 C7orf34Q96L11 122 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 CASD1Q96PB1 797 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 MAPKAP1Q9BPZ7 522 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 CORO1BQ9BR76 489 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 SIAEQ9HAT2 523 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 THSD1Q9NS62 852 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 GKN1Q9NS71 199 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 RAD18Q9NS91 495 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 FBXO10Q9UK96 956 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 FZD4Q9ULV1 537 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 PLXNA4Q9HCM2 1894 aa9.71□□□□□ -0.86
UBE2D3-208ENST00000394803 COPZ1P61923 177 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 KCNJ10P78508 379 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 PCDH1Q08174 1060 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 FCHO2Q0JRZ9 810 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 MBTPS1Q14703 1052 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 SMN1Q16637 294 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 COLEC12Q5KU26 742 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 ATAD3BQ5T9A4 648 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 GRHL2Q6ISB3 625 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 RSPO2Q6UXX9 243 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 MBOAT1Q6ZNC8 495 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 ST13P5Q8NFI4 369 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 OR10Q1Q8NGQ4 319 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 APH1BQ8WW43 257 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 DNASE1L2Q92874 299 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 TIFAQ96CG3 184 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 TMCO6Q96DC7 493 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 ALG14Q96F25 216 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 CEP19Q96LK0 163 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 BARD1Q99728 777 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 TM6SF2Q9BZW4 377 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 ZBTB20Q9HC78 741 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 PNMA8BQ9ULN7 279 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.7□□□□□ -0.864e-10■■■□□ 19.2
UBE2D3-208ENST00000394803 DUSP12Q9UNI6 340 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 PPIL1Q9Y3C6 166 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 GRIP1Q9Y3R0 1128 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 LYVE1Q9Y5Y7 322 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 ARRDC5A6NEK1 342 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 MGAT4DA6NG13 374 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 PDZK1P1A8MUH7 402 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 H0YIV9 168 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 RNASET2O00584 256 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 TBX1O43435 398 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 SCN2BO60939 215 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 KRT8P05787 483 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 GSTT2P0CG29 244 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 GSTT2BP0CG30 244 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 DBTP11182 482 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 HMGA1P17096 107 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 FSHRP23945 695 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 GADD45AP24522 165 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 CCR7P32248 378 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 LIPAP38571 399 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 NEK2P51955 445 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 UGT2B15P54855 530 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 WNT3P56703 355 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 SMAD3P84022 425 aaKnown RBP9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 HSPA14Q0VDF9 509 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 SREBF2Q12772 1141 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 SELENBP1Q13228 472 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 SLC14A1Q13336 389 aa9.7□□□□□ -0.86
UBE2D3-208ENST00000394803 PPIGQ13427 754 aaKnown RBP eCLIP9.7□□□□□ -0.865e-7■□□□□ 10
UBE2D3-208ENST00000394803 LAPTM4AQ15012 233 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms