RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ELAVL4P26378 380 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PDIA3P30101 505 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MAPK4P31152 587 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HOXC9P31274 260 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RYKP34925 604 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PIK3CBP42338 1070 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC15A1P46059 708 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RPL21P46778 160 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PCP4P48539 62 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 INPP1P49441 399 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NT5C2P49902 561 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 EMDP50402 254 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CCR6P51684 374 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS6KA3P51812 740 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MAP2K6P52564 334 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LBX1P52954 281 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ALDH18A1P54886 795 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NR1H2P55055 460 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ADKP55263 362 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ADARP55265 1226 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 UBASH3AP57075 661 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 EVA1CP58658 441 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RPL15P61313 204 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS8P62241 208 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TAGLNQ01995 201 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PAX2Q02962 417 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 BTKQ06187 659 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CD47Q08722 323 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 C17orf67Q0P5P2 114 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SMARCB1Q12824 385 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FOXD4Q12950 439 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PRKG2Q13237 762 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MAD2L1Q13257 205 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TPBGQ13641 420 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ATP1A4Q13733 1029 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM50AQ14320 339 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CSHL1Q14406 222 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GRM4Q14833 912 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ABRAXAS2Q15018 415 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ACAP2Q15057 778 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RNPS1Q15287 305 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TSC22D1Q15714 1073 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CD226Q15762 336 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HSPB2Q16082 182 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PDCD2Q16342 344 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RPE65Q16518 533 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SYPL1Q16563 259 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 DECR1Q16698 335 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PCK2Q16822 640 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC57Q2TAC2 916 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 AP5B1Q2VPB7 878 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 POM121L1PQ3SYA9 428 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 DEFB134Q4QY38 66 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC25A53Q5H9E4 307 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 EOGTQ5NDL2 527 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LCN1P1Q5VSP4 162 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SUSD4Q5VX71 490 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXW9Q5XUX1 488 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SULT1C3Q6IMI6 304 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF280DQ6N043 979 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ANKRD54Q6NXT1 300 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MSANTD2Q6P1R3 559 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PAPD4Q6PIY7 484 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SPINT4Q6UDR6 99 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 B3GNT9Q6UX72 402 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LEKR1Q6ZMV7 388 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GCNT7Q6ZNI0 430 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MSANTD1Q6ZTZ1 278 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LINGO2Q7L985 606 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PRSS41Q7RTY9 318 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CACNA2D4Q7Z3S7 1137 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM220AQ7Z4H9 259 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D26Q86UD7 250 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NT5DC3Q86UY8 548 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ERICH1Q86X53 443 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MICU3Q86XE3 530 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NRROSQ86YC3 692 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SCN4BQ8IWT1 228 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CMIPQ8IY22 773 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 UBALD2Q8IYN6 164 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PM20D2Q8IYS1 436 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GCNT2Q8N0V5 402 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CNTROBQ8N137 903 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC22A18ASQ8N1D0 253 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 BEST3Q8N1M1 668 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CRYBG2Q8N1P7 616 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 THEM5Q8N1Q8 247 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SPATA6LQ8N4H0 392 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CARNMT1Q8N4J0 409 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZBTB2Q8N680 514 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 C1orf52Q8N6N3 182 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PAF1Q8N7H5 531 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF557Q8N988 423 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 BANPQ8N9N5 519 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF527Q8NB42 609 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SUMF2Q8NBJ7 301 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FBXL13Q8NEE6 735 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF680Q8NEM1 530 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 BBS1Q8NFJ9 593 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 BEST2Q8NFU1 509 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms