RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TMEM5Q9Y2B1 443 aa2.53□□□□□ -2
TRAV40-201ENST00000390467 FER1L5A0AVI2 2057 aa2.53□□□□□ -2.01
TRAV40-201ENST00000390467 ATRXP46100 2492 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 SLC1A7O00341 560 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 RTCAO00442 366 aaKnown RBP2.52□□□□□ -2.01
TRAV40-201ENST00000390467 SNX3O60493 162 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 PCP11498 1178 aaKnown RBP2.52□□□□□ -2.01
TRAV40-201ENST00000390467 AADACP22760 399 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 LIG4P49917 911 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 ASCL1P50553 236 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 NDST2P52849 883 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 C3AR1Q16581 482 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 CTR9Q6PD62 1173 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 CENPVQ7Z7K6 275 aaPredicted RBP2.52□□□□□ -2.01
TRAV40-201ENST00000390467 RNF130Q86XS8 419 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 RCOR2Q8IZ40 523 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 SLC34A3Q8N130 599 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.52□□□□□ -2.01
TRAV40-201ENST00000390467 PROX1Q92786 737 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 NEDD4LQ96PU5 975 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 CDCA3Q99618 268 aaPredicted RBP2.52□□□□□ -2.01
TRAV40-201ENST00000390467 SLITRK2Q9H156 845 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 IL17BQ9UHF5 180 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 ANAPC2Q9UJX6 822 aa2.52□□□□□ -2.01
TRAV40-201ENST00000390467 MAGED1Q9Y5V3 778 aaPredicted RBP2.52□□□□□ -2.01
TRAV40-201ENST00000390467 ANKRD18BA2A2Z9 1011 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 RTL8CO15255 209 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 AP5Z1O43299 807 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 AHCYL1O43865 530 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 ABCB1P08183 1280 aaPredicted RBP2.51□□□□□ -2.01
TRAV40-201ENST00000390467 SAGP10523 405 aaPredicted RBP2.51□□□□□ -2.01
TRAV40-201ENST00000390467 CCR3P51677 355 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 NDUFV3P56181 108 aaKnown RBP2.51□□□□□ -2.01
TRAV40-201ENST00000390467 UBASH3AP57075 661 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 KIAA0141Q14154 515 aaPredicted RBP2.51□□□□□ -2.01
TRAV40-201ENST00000390467 TMEM266Q2M3C6 531 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 LETM2Q2VYF4 491 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 FAM182AQ5T1J6 154 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 ZBTB49Q6ZSB9 765 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 GPD1LQ8N335 351 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 FGFRL1Q8N441 504 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 ANKRD13CQ8N6S4 541 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 TCEANCQ8N8B7 351 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 SLC4A11Q8NBS3 891 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 SPPL2AQ8TCT8 520 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 NSMAFQ92636 917 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 TSACCQ96A04 125 aaPredicted RBP2.51□□□□□ -2.01
TRAV40-201ENST00000390467 OCR1Q9BZK8 76 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 GSN-AS1Q9NRJ2 163 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 TBC1D13Q9NVG8 400 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 HACD3Q9P035 362 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 SNX8Q9Y5X2 465 aa2.51□□□□□ -2.01
TRAV40-201ENST00000390467 NEDD4P46934 1319 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 A0A087WZ39 114 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 TRAV24A0A0B4J272 114 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 hCG_1809904A0A1W2PP81 198 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 A0A1W2PPE2 198 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 A0A1W2PQ72 361 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 A0A1W2PR64 198 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 TRAFD1O14545 582 aaPredicted RBP2.5□□□□□ -2.01
TRAV40-201ENST00000390467 CYTIPO60759 359 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 SAP30O75446 220 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 RPS6KA5O75582 802 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 SLCO2B1O94956 709 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 SERPING1P05155 500 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 CD59P13987 128 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 LMAN1P49257 510 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 PTPRCAPQ14761 206 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 SIX1Q15475 284 aaPredicted RBP2.5□□□□□ -2.01
TRAV40-201ENST00000390467 UPP1Q16831 310 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 BMP2KLQ5H9B9 411 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 ATP1A1-AS1Q5TC04 95 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 SUSD4Q5VX71 490 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 RNLSQ5VYX0 342 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 CYB5D1Q6P9G0 228 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 CPEB2Q7Z5Q1 589 aaKnown RBP2.5□□□□□ -2.01
TRAV40-201ENST00000390467 CD177Q8N6Q3 437 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 OR4D10Q8NGI6 311 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 RPLP0P6Q8NHW5 317 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 CHURC1Q8WUH1 139 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 BTBD9Q96Q07 612 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 PSMB7Q99436 277 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 NDNQ99608 321 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 TNFRSF19Q9NS68 423 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 TRPV2Q9Y5S1 764 aa2.5□□□□□ -2.01
TRAV40-201ENST00000390467 EDDM13A0A1B0GTR0 161 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 ARHGEF33A8MVX0 844 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 CLDN4O14493 209 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 OGTO15294 1046 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 PSMD10O75832 226 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 CELF2O95319 508 aaKnown RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 RPLP0P05388 317 aaKnown RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 F3P13726 295 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 KLK2P20151 261 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 MC5RP33032 325 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 DUTP33316 252 aaKnown RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 PCGF2P35227 344 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 CLNS1AP54105 237 aaKnown RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 NDPQ00604 133 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 SNTB1Q13884 538 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms